Gene
RNA
| Item | Value |
|---|---|
| gene id | G2297797 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 12938205 ~ 12938464 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2628564 | True | 260 | lncRNA | 0.48 | 1 | 12938205 | 12938464 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487937 | LOC106588828 | coding | upstream | 465957 | 12425043 ~ 12472248 (+) |
| col8a2 | LOC106570550 | coding | upstream | 524056 | 12322871 ~ 12414149 (+) |
| LOC110487924 | LOC106570549 | coding | upstream | 784468 | 12146678 ~ 12153737 (+) |
| LOC110489380 | LOC106570560 | coding | upstream | 825744 | 11983291 ~ 12112461 (+) |
| LOC110487934 | LOC106570559 | coding | upstream | 979126 | 11931558 ~ 11959079 (+) |
| LOC118946451 | adgrb2 | coding | downstream | 335756 | 13274220 ~ 13491588 (+) |
| LOC110487938 | adgrb2 | coding | downstream | 569124 | 13507588 ~ 13724989 (+) |
| LOC110487940 | LOC106588839 | coding | downstream | 912511 | 13850975 ~ 14003434 (+) |
| LOC110487944 | LOC106570514 | coding | downstream | 1206537 | 14145001 ~ 14175807 (+) |
| LOC110487945 | cbx3 | coding | downstream | 1239855 | 14178319 ~ 14187277 (+) |
| G2297793 | NA | non-coding | upstream | 3917 | 12934015 ~ 12934288 (+) |
| G2297790 | NA | non-coding | upstream | 5675 | 12932311 ~ 12932530 (+) |
| G2297780 | NA | non-coding | upstream | 13141 | 12924859 ~ 12925064 (+) |
| G2297769 | NA | non-coding | upstream | 21853 | 12916137 ~ 12916352 (+) |
| G2297755 | NA | non-coding | upstream | 38258 | 12899708 ~ 12899947 (+) |
| G2297832 | LOC100194703 | non-coding | downstream | 29465 | 12967929 ~ 12968181 (+) |
| G2297851 | NA | non-coding | downstream | 42731 | 12981195 ~ 12981404 (+) |
| G2297878 | NA | non-coding | downstream | 62066 | 13000530 ~ 13000767 (+) |
| G2297879 | NA | non-coding | downstream | 64590 | 13003054 ~ 13003886 (+) |
| G2297904 | NA | non-coding | downstream | 82463 | 13020927 ~ 13021247 (+) |
| G2296450 | NA | other | upstream | 1020065 | 11915196 ~ 11977297 (+) |
| LOC110487932 | LOC106570557 | other | upstream | 1029539 | 11906205 ~ 11910366 (+) |
| G2296278 | NA | other | upstream | 1373615 | 11563547 ~ 11564590 (+) |
| G2296150 | LOC106570575 | other | upstream | 1647902 | 11285493 ~ 11290303 (+) |
| LOC110487904 | snrpd1 | other | upstream | 2416898 | 10509464 ~ 10521398 (+) |
| G2298390 | NA | other | downstream | 691598 | 13630062 ~ 13630795 (+) |
| G2298739 | NA | other | downstream | 814803 | 13753267 ~ 13753517 (+) |
| G2298884 | NA | other | downstream | 1075768 | 14014232 ~ 14015587 (+) |
| LOC118936620 | LOC106570515 | other | downstream | 1268702 | 14207166 ~ 14225549 (+) |
| G2299191 | NA | other | downstream | 1365272 | 14303736 ~ 14304232 (+) |
