G2297832 (LOC100194703)


Basic Information

Item Value
gene id G2297832
gene name LOC100194703
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 12967929 ~ 12968181 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2628599
gacaagttttttccggatgccccaaacaatcggataggggattcatcagagaaaatgactttaccgcagtcctcagcagtccaatccctgtacctttggcAGAATATCAGTTTGtcactgatgtttttcctggagagtagtggcttctttgctgcccttcttgacaccaggccatcctccaacaCTCTTCGCCTcgctgtgtgtgcagatgcactcacacctgcctgctgccattcctgagcaagctttgtac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2628599 True 253 lncRNA 0.50 1 12967929 12968181

Neighbor

gene id symbol gene type direction distance location
LOC110487937 LOC106588828 coding upstream 495681 12425043 ~ 12472248 (+)
col8a2 LOC106570550 coding upstream 553780 12322871 ~ 12414149 (+)
LOC110487924 LOC106570549 coding upstream 814192 12146678 ~ 12153737 (+)
LOC110489380 LOC106570560 coding upstream 855468 11983291 ~ 12112461 (+)
LOC110487934 LOC106570559 coding upstream 1008850 11931558 ~ 11959079 (+)
LOC118946451 adgrb2 coding downstream 306039 13274220 ~ 13491588 (+)
LOC110487938 adgrb2 coding downstream 539407 13507588 ~ 13724989 (+)
LOC110487940 LOC106588839 coding downstream 882794 13850975 ~ 14003434 (+)
LOC110487944 LOC106570514 coding downstream 1176820 14145001 ~ 14175807 (+)
LOC110487945 cbx3 coding downstream 1210138 14178319 ~ 14187277 (+)
G2297797 NA non-coding upstream 29465 12938205 ~ 12938464 (+)
G2297793 NA non-coding upstream 33641 12934015 ~ 12934288 (+)
G2297790 NA non-coding upstream 35399 12932311 ~ 12932530 (+)
G2297780 NA non-coding upstream 42865 12924859 ~ 12925064 (+)
G2297769 NA non-coding upstream 51577 12916137 ~ 12916352 (+)
G2297851 NA non-coding downstream 13014 12981195 ~ 12981404 (+)
G2297878 NA non-coding downstream 32349 13000530 ~ 13000767 (+)
G2297879 NA non-coding downstream 34873 13003054 ~ 13003886 (+)
G2297904 NA non-coding downstream 52746 13020927 ~ 13021247 (+)
G2297967 NA non-coding downstream 98249 13066430 ~ 13066819 (+)
G2296450 NA other upstream 1049789 11915196 ~ 11977297 (+)
LOC110487932 LOC106570557 other upstream 1059263 11906205 ~ 11910366 (+)
G2296278 NA other upstream 1403339 11563547 ~ 11564590 (+)
G2296150 LOC106570575 other upstream 1677626 11285493 ~ 11290303 (+)
LOC110487904 snrpd1 other upstream 2446622 10509464 ~ 10521398 (+)
G2298390 NA other downstream 661881 13630062 ~ 13630795 (+)
G2298739 NA other downstream 785086 13753267 ~ 13753517 (+)
G2298884 NA other downstream 1046051 14014232 ~ 14015587 (+)
LOC118936620 LOC106570515 other downstream 1238985 14207166 ~ 14225549 (+)
G2299191 NA other downstream 1335555 14303736 ~ 14304232 (+)

Expression


Co-expression Network