G2297878


Basic Information

Item Value
gene id G2297878
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 13000530 ~ 13000767 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2628645
ggtgccattaatacaggtaacgagtggaggacagaggagcctcttaaaaaagaagttacaggtctgtgagagccagaaatcttgcttgtttgtaggtgaccaaatacttattttccaccattttttgcaaataaattcattaaaaatcctacattgtgaatttctggaatttttttctcattttgtctgtcatagttgaagtgtacctaggatgaaaattacaggcctctctcatctt

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2628645 True 238 lncRNA 0.36 1 13000530 13000767

Neighbor

gene id symbol gene type direction distance location
LOC110487937 LOC106588828 coding upstream 528282 12425043 ~ 12472248 (+)
col8a2 LOC106570550 coding upstream 586381 12322871 ~ 12414149 (+)
LOC110487924 LOC106570549 coding upstream 846793 12146678 ~ 12153737 (+)
LOC110489380 LOC106570560 coding upstream 888069 11983291 ~ 12112461 (+)
LOC110487934 LOC106570559 coding upstream 1041451 11931558 ~ 11959079 (+)
LOC118946451 adgrb2 coding downstream 273453 13274220 ~ 13491588 (+)
LOC110487938 adgrb2 coding downstream 506821 13507588 ~ 13724989 (+)
LOC110487940 LOC106588839 coding downstream 850208 13850975 ~ 14003434 (+)
LOC110487944 LOC106570514 coding downstream 1144234 14145001 ~ 14175807 (+)
LOC110487945 cbx3 coding downstream 1177552 14178319 ~ 14187277 (+)
G2297851 NA non-coding upstream 19126 12981195 ~ 12981404 (+)
G2297832 LOC100194703 non-coding upstream 32349 12967929 ~ 12968181 (+)
G2297797 NA non-coding upstream 62066 12938205 ~ 12938464 (+)
G2297793 NA non-coding upstream 66242 12934015 ~ 12934288 (+)
G2297790 NA non-coding upstream 68000 12932311 ~ 12932530 (+)
G2297879 NA non-coding downstream 2287 13003054 ~ 13003886 (+)
G2297904 NA non-coding downstream 20160 13020927 ~ 13021247 (+)
G2297967 NA non-coding downstream 65663 13066430 ~ 13066819 (+)
G2298012 NA non-coding downstream 101225 13101992 ~ 13102205 (+)
G2298049 NA non-coding downstream 137294 13138061 ~ 13138286 (+)
G2296450 NA other upstream 1082390 11915196 ~ 11977297 (+)
LOC110487932 LOC106570557 other upstream 1091864 11906205 ~ 11910366 (+)
G2296278 NA other upstream 1435940 11563547 ~ 11564590 (+)
G2296150 LOC106570575 other upstream 1710227 11285493 ~ 11290303 (+)
LOC110487904 snrpd1 other upstream 2479223 10509464 ~ 10521398 (+)
G2298390 NA other downstream 629295 13630062 ~ 13630795 (+)
G2298739 NA other downstream 752500 13753267 ~ 13753517 (+)
G2298884 NA other downstream 1013465 14014232 ~ 14015587 (+)
LOC118936620 LOC106570515 other downstream 1206399 14207166 ~ 14225549 (+)
G2299191 NA other downstream 1302969 14303736 ~ 14304232 (+)

Expression


Co-expression Network