G2297879


Basic Information

Item Value
gene id G2297879
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 13003054 ~ 13003886 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2628646
GTATGTTTCTATCCATCAAATACAGGTGTATGTTCCTATCCATCATATCCAGGTGTATGTTCCTCTACATGGTGTACAGGTGTATGTTCCTATCCATCATATACAGGTGTATGTTTCTATCCATCATATCCAGGTGTATGTTCCTATCCATCATATACAGGTGTATGTTCCTATCCATCATATCCAGGTGTATGTTCCTATCCATCATATCCAGGTGTATGTTCCTCTACATGGTGTACACGTGTATGTTCCTATTTTCTCATTGC

Function

NR:

description
PREDICTED: TCDD-inducible poly [ADP-ribose] polymerase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2628646 True 266 lncRNA 0.39 2 13003054 13003886

Neighbor

gene id symbol gene type direction distance location
LOC110487937 LOC106588828 coding upstream 530806 12425043 ~ 12472248 (+)
col8a2 LOC106570550 coding upstream 588905 12322871 ~ 12414149 (+)
LOC110487924 LOC106570549 coding upstream 849317 12146678 ~ 12153737 (+)
LOC110489380 LOC106570560 coding upstream 890593 11983291 ~ 12112461 (+)
LOC110487934 LOC106570559 coding upstream 1043975 11931558 ~ 11959079 (+)
LOC118946451 adgrb2 coding downstream 270334 13274220 ~ 13491588 (+)
LOC110487938 adgrb2 coding downstream 503702 13507588 ~ 13724989 (+)
LOC110487940 LOC106588839 coding downstream 847089 13850975 ~ 14003434 (+)
LOC110487944 LOC106570514 coding downstream 1141115 14145001 ~ 14175807 (+)
LOC110487945 cbx3 coding downstream 1174433 14178319 ~ 14187277 (+)
G2297878 NA non-coding upstream 2287 13000530 ~ 13000767 (+)
G2297851 NA non-coding upstream 21650 12981195 ~ 12981404 (+)
G2297832 LOC100194703 non-coding upstream 34873 12967929 ~ 12968181 (+)
G2297797 NA non-coding upstream 64590 12938205 ~ 12938464 (+)
G2297793 NA non-coding upstream 68766 12934015 ~ 12934288 (+)
G2297904 NA non-coding downstream 17041 13020927 ~ 13021247 (+)
G2297967 NA non-coding downstream 62544 13066430 ~ 13066819 (+)
G2298012 NA non-coding downstream 98106 13101992 ~ 13102205 (+)
G2298049 NA non-coding downstream 134175 13138061 ~ 13138286 (+)
G2298069 NA non-coding downstream 153174 13157060 ~ 13157488 (+)
G2296450 NA other upstream 1084914 11915196 ~ 11977297 (+)
LOC110487932 LOC106570557 other upstream 1094388 11906205 ~ 11910366 (+)
G2296278 NA other upstream 1438464 11563547 ~ 11564590 (+)
G2296150 LOC106570575 other upstream 1712751 11285493 ~ 11290303 (+)
LOC110487904 snrpd1 other upstream 2481747 10509464 ~ 10521398 (+)
G2298390 NA other downstream 626176 13630062 ~ 13630795 (+)
G2298739 NA other downstream 749381 13753267 ~ 13753517 (+)
G2298884 NA other downstream 1010346 14014232 ~ 14015587 (+)
LOC118936620 LOC106570515 other downstream 1203280 14207166 ~ 14225549 (+)
G2299191 NA other downstream 1299850 14303736 ~ 14304232 (+)

Expression


Co-expression Network