Gene
RNA
| Item | Value |
|---|---|
| gene id | G2298012 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 13101992 ~ 13102205 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2628780 | True | 214 | lncRNA | 0.39 | 1 | 13101992 | 13102205 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487937 | LOC106588828 | coding | upstream | 629744 | 12425043 ~ 12472248 (+) |
| col8a2 | LOC106570550 | coding | upstream | 687843 | 12322871 ~ 12414149 (+) |
| LOC110487924 | LOC106570549 | coding | upstream | 948255 | 12146678 ~ 12153737 (+) |
| LOC110489380 | LOC106570560 | coding | upstream | 989531 | 11983291 ~ 12112461 (+) |
| LOC110487934 | LOC106570559 | coding | upstream | 1142913 | 11931558 ~ 11959079 (+) |
| LOC118946451 | adgrb2 | coding | downstream | 172015 | 13274220 ~ 13491588 (+) |
| LOC110487938 | adgrb2 | coding | downstream | 405383 | 13507588 ~ 13724989 (+) |
| LOC110487940 | LOC106588839 | coding | downstream | 748770 | 13850975 ~ 14003434 (+) |
| LOC110487944 | LOC106570514 | coding | downstream | 1042796 | 14145001 ~ 14175807 (+) |
| LOC110487945 | cbx3 | coding | downstream | 1076114 | 14178319 ~ 14187277 (+) |
| G2297967 | NA | non-coding | upstream | 35173 | 13066430 ~ 13066819 (+) |
| G2297904 | NA | non-coding | upstream | 80745 | 13020927 ~ 13021247 (+) |
| G2297879 | NA | non-coding | upstream | 98106 | 13003054 ~ 13003886 (+) |
| G2297878 | NA | non-coding | upstream | 101225 | 13000530 ~ 13000767 (+) |
| G2297851 | NA | non-coding | upstream | 120588 | 12981195 ~ 12981404 (+) |
| G2298049 | NA | non-coding | downstream | 35856 | 13138061 ~ 13138286 (+) |
| G2298069 | NA | non-coding | downstream | 54855 | 13157060 ~ 13157488 (+) |
| G2298117 | NA | non-coding | downstream | 100195 | 13202400 ~ 13202642 (+) |
| G2298121 | NA | non-coding | downstream | 104813 | 13207018 ~ 13207232 (+) |
| G2298125 | NA | non-coding | downstream | 108069 | 13210274 ~ 13210559 (+) |
| G2296450 | NA | other | upstream | 1183852 | 11915196 ~ 11977297 (+) |
| LOC110487932 | LOC106570557 | other | upstream | 1193326 | 11906205 ~ 11910366 (+) |
| G2296278 | NA | other | upstream | 1537402 | 11563547 ~ 11564590 (+) |
| G2296150 | LOC106570575 | other | upstream | 1811689 | 11285493 ~ 11290303 (+) |
| LOC110487904 | snrpd1 | other | upstream | 2580685 | 10509464 ~ 10521398 (+) |
| G2298390 | NA | other | downstream | 527857 | 13630062 ~ 13630795 (+) |
| G2298739 | NA | other | downstream | 651062 | 13753267 ~ 13753517 (+) |
| G2298884 | NA | other | downstream | 912027 | 14014232 ~ 14015587 (+) |
| LOC118936620 | LOC106570515 | other | downstream | 1104961 | 14207166 ~ 14225549 (+) |
| G2299191 | NA | other | downstream | 1201531 | 14303736 ~ 14304232 (+) |
