G2298049


Basic Information

Item Value
gene id G2298049
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 13138061 ~ 13138286 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2628818
attagcttataAAACTTCTTGACGCACCGATCCCTTTagtgggatcattttcgtcaacatccgcggaattgcagagcgccaaataaaaatatttaattttcatgaaattacaagtgcaatataccaaaacacagtttagcttgttgttaatccacctggcatgtcatatttcaaaaaagctttacagtgaaagctATCCAAGCGTTAATGTTAGGAcagctctctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2628818 True 226 lncRNA 0.37 1 13138061 13138286

Neighbor

gene id symbol gene type direction distance location
LOC110487937 LOC106588828 coding upstream 665813 12425043 ~ 12472248 (+)
col8a2 LOC106570550 coding upstream 723912 12322871 ~ 12414149 (+)
LOC110487924 LOC106570549 coding upstream 984324 12146678 ~ 12153737 (+)
LOC110489380 LOC106570560 coding upstream 1025600 11983291 ~ 12112461 (+)
LOC110487934 LOC106570559 coding upstream 1178982 11931558 ~ 11959079 (+)
LOC118946451 adgrb2 coding downstream 135934 13274220 ~ 13491588 (+)
LOC110487938 adgrb2 coding downstream 369302 13507588 ~ 13724989 (+)
LOC110487940 LOC106588839 coding downstream 712689 13850975 ~ 14003434 (+)
LOC110487944 LOC106570514 coding downstream 1006715 14145001 ~ 14175807 (+)
LOC110487945 cbx3 coding downstream 1040033 14178319 ~ 14187277 (+)
G2298012 NA non-coding upstream 35856 13101992 ~ 13102205 (+)
G2297967 NA non-coding upstream 71242 13066430 ~ 13066819 (+)
G2297904 NA non-coding upstream 116814 13020927 ~ 13021247 (+)
G2297879 NA non-coding upstream 134175 13003054 ~ 13003886 (+)
G2297878 NA non-coding upstream 137294 13000530 ~ 13000767 (+)
G2298069 NA non-coding downstream 18774 13157060 ~ 13157488 (+)
G2298117 NA non-coding downstream 64114 13202400 ~ 13202642 (+)
G2298121 NA non-coding downstream 68732 13207018 ~ 13207232 (+)
G2298125 NA non-coding downstream 71988 13210274 ~ 13210559 (+)
G2298126 NA non-coding downstream 73850 13212136 ~ 13212359 (+)
G2296450 NA other upstream 1219921 11915196 ~ 11977297 (+)
LOC110487932 LOC106570557 other upstream 1229395 11906205 ~ 11910366 (+)
G2296278 NA other upstream 1573471 11563547 ~ 11564590 (+)
G2296150 LOC106570575 other upstream 1847758 11285493 ~ 11290303 (+)
LOC110487904 snrpd1 other upstream 2616754 10509464 ~ 10521398 (+)
G2298390 NA other downstream 491776 13630062 ~ 13630795 (+)
G2298739 NA other downstream 614981 13753267 ~ 13753517 (+)
G2298884 NA other downstream 875946 14014232 ~ 14015587 (+)
LOC118936620 LOC106570515 other downstream 1068880 14207166 ~ 14225549 (+)
G2299191 NA other downstream 1165450 14303736 ~ 14304232 (+)

Expression


Co-expression Network