Gene
RNA
| Item | Value |
|---|---|
| gene id | G2298069 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 13157060 ~ 13157488 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2628838 | True | 227 | lncRNA | 0.35 | 2 | 13157060 | 13157488 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487937 | LOC106588828 | coding | upstream | 684812 | 12425043 ~ 12472248 (+) |
| col8a2 | LOC106570550 | coding | upstream | 742911 | 12322871 ~ 12414149 (+) |
| LOC110487924 | LOC106570549 | coding | upstream | 1003323 | 12146678 ~ 12153737 (+) |
| LOC110489380 | LOC106570560 | coding | upstream | 1044599 | 11983291 ~ 12112461 (+) |
| LOC110487934 | LOC106570559 | coding | upstream | 1197981 | 11931558 ~ 11959079 (+) |
| LOC118946451 | adgrb2 | coding | downstream | 116732 | 13274220 ~ 13491588 (+) |
| LOC110487938 | adgrb2 | coding | downstream | 350100 | 13507588 ~ 13724989 (+) |
| LOC110487940 | LOC106588839 | coding | downstream | 693487 | 13850975 ~ 14003434 (+) |
| LOC110487944 | LOC106570514 | coding | downstream | 987513 | 14145001 ~ 14175807 (+) |
| LOC110487945 | cbx3 | coding | downstream | 1020831 | 14178319 ~ 14187277 (+) |
| G2298049 | NA | non-coding | upstream | 18774 | 13138061 ~ 13138286 (+) |
| G2298012 | NA | non-coding | upstream | 54855 | 13101992 ~ 13102205 (+) |
| G2297967 | NA | non-coding | upstream | 90241 | 13066430 ~ 13066819 (+) |
| G2297904 | NA | non-coding | upstream | 135813 | 13020927 ~ 13021247 (+) |
| G2297879 | NA | non-coding | upstream | 153174 | 13003054 ~ 13003886 (+) |
| G2298117 | NA | non-coding | downstream | 44912 | 13202400 ~ 13202642 (+) |
| G2298121 | NA | non-coding | downstream | 49530 | 13207018 ~ 13207232 (+) |
| G2298125 | NA | non-coding | downstream | 52786 | 13210274 ~ 13210559 (+) |
| G2298126 | NA | non-coding | downstream | 54648 | 13212136 ~ 13212359 (+) |
| G2298129 | NA | non-coding | downstream | 56806 | 13214294 ~ 13214580 (+) |
| G2296450 | NA | other | upstream | 1238920 | 11915196 ~ 11977297 (+) |
| LOC110487932 | LOC106570557 | other | upstream | 1248394 | 11906205 ~ 11910366 (+) |
| G2296278 | NA | other | upstream | 1592470 | 11563547 ~ 11564590 (+) |
| G2296150 | LOC106570575 | other | upstream | 1866757 | 11285493 ~ 11290303 (+) |
| LOC110487904 | snrpd1 | other | upstream | 2635753 | 10509464 ~ 10521398 (+) |
| G2298390 | NA | other | downstream | 472574 | 13630062 ~ 13630795 (+) |
| G2298739 | NA | other | downstream | 595779 | 13753267 ~ 13753517 (+) |
| G2298884 | NA | other | downstream | 856744 | 14014232 ~ 14015587 (+) |
| LOC118936620 | LOC106570515 | other | downstream | 1049678 | 14207166 ~ 14225549 (+) |
| G2299191 | NA | other | downstream | 1146248 | 14303736 ~ 14304232 (+) |
