G2298117


Basic Information

Item Value
gene id G2298117
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 13202400 ~ 13202642 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2628886
gttcattagagttaactgaacctcagattgcagcctaaataaatgcttcaaagacttcatgtaacagacacatctcaacatcaactgttcagagactgcatgaatcaggccttcatggtcaaattgctgcaaagaaaccactgctaaaggacaccaataagaagaagagacttttcttgggccaagaaaagcAATGGAAGTTTTTggtttgatttttggttccaacagctgAGTAGGTGAATG

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2628886 True 243 lncRNA 0.40 1 13202400 13202642

Neighbor

gene id symbol gene type direction distance location
LOC110487937 LOC106588828 coding upstream 730152 12425043 ~ 12472248 (+)
col8a2 LOC106570550 coding upstream 788251 12322871 ~ 12414149 (+)
LOC110487924 LOC106570549 coding upstream 1048663 12146678 ~ 12153737 (+)
LOC110489380 LOC106570560 coding upstream 1089939 11983291 ~ 12112461 (+)
LOC110487934 LOC106570559 coding upstream 1243321 11931558 ~ 11959079 (+)
LOC118946451 adgrb2 coding downstream 71578 13274220 ~ 13491588 (+)
LOC110487938 adgrb2 coding downstream 304946 13507588 ~ 13724989 (+)
LOC110487940 LOC106588839 coding downstream 648333 13850975 ~ 14003434 (+)
LOC110487944 LOC106570514 coding downstream 942359 14145001 ~ 14175807 (+)
LOC110487945 cbx3 coding downstream 975677 14178319 ~ 14187277 (+)
G2298069 NA non-coding upstream 44912 13157060 ~ 13157488 (+)
G2298049 NA non-coding upstream 64114 13138061 ~ 13138286 (+)
G2298012 NA non-coding upstream 100195 13101992 ~ 13102205 (+)
G2297967 NA non-coding upstream 135581 13066430 ~ 13066819 (+)
G2297904 NA non-coding upstream 181153 13020927 ~ 13021247 (+)
G2298121 NA non-coding downstream 4376 13207018 ~ 13207232 (+)
G2298125 NA non-coding downstream 7632 13210274 ~ 13210559 (+)
G2298126 NA non-coding downstream 9494 13212136 ~ 13212359 (+)
G2298129 NA non-coding downstream 11652 13214294 ~ 13214580 (+)
G2298211 NA non-coding downstream 118899 13321541 ~ 13321947 (+)
G2296450 NA other upstream 1284260 11915196 ~ 11977297 (+)
LOC110487932 LOC106570557 other upstream 1293734 11906205 ~ 11910366 (+)
G2296278 NA other upstream 1637810 11563547 ~ 11564590 (+)
G2296150 LOC106570575 other upstream 1912097 11285493 ~ 11290303 (+)
LOC110487904 snrpd1 other upstream 2681093 10509464 ~ 10521398 (+)
G2298390 NA other downstream 427420 13630062 ~ 13630795 (+)
G2298739 NA other downstream 550625 13753267 ~ 13753517 (+)
G2298884 NA other downstream 811590 14014232 ~ 14015587 (+)
LOC118936620 LOC106570515 other downstream 1004524 14207166 ~ 14225549 (+)
G2299191 NA other downstream 1101094 14303736 ~ 14304232 (+)

Expression


Co-expression Network