G2298125


Basic Information

Item Value
gene id G2298125
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 13210274 ~ 13210559 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2628894
CAAGCTGGTGACTGGCTAGAGCTGCAGAAGAATAACCCTTCACTGGCCacttgtgatattcttcaacatcttCAACATCTCGCCGTACAACACGTTTGTCATCTGGATGGCGTTGAACACAGATTGGAACATGGGAGACGTCTCTTCCTCGAGGAGCTTGGCAAGGcattggtaagacctcaaatccagaggaagcaacatatcccaaggaccccagcttctgcagccatcgtgaggaggttccaggaggaggatgttgatgCCCTACCTACAGAACCAATAACTC

Function

NR:

description
PREDICTED: piggyBac transposable element-derived protein 4-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2628894 True 286 lncRNA 0.50 1 13210274 13210559

Neighbor

gene id symbol gene type direction distance location
LOC110487937 LOC106588828 coding upstream 738026 12425043 ~ 12472248 (+)
col8a2 LOC106570550 coding upstream 796125 12322871 ~ 12414149 (+)
LOC110487924 LOC106570549 coding upstream 1056537 12146678 ~ 12153737 (+)
LOC110489380 LOC106570560 coding upstream 1097813 11983291 ~ 12112461 (+)
LOC110487934 LOC106570559 coding upstream 1251195 11931558 ~ 11959079 (+)
LOC118946451 adgrb2 coding downstream 63661 13274220 ~ 13491588 (+)
LOC110487938 adgrb2 coding downstream 297029 13507588 ~ 13724989 (+)
LOC110487940 LOC106588839 coding downstream 640416 13850975 ~ 14003434 (+)
LOC110487944 LOC106570514 coding downstream 934442 14145001 ~ 14175807 (+)
LOC110487945 cbx3 coding downstream 967760 14178319 ~ 14187277 (+)
G2298121 NA non-coding upstream 3042 13207018 ~ 13207232 (+)
G2298117 NA non-coding upstream 7632 13202400 ~ 13202642 (+)
G2298069 NA non-coding upstream 52786 13157060 ~ 13157488 (+)
G2298049 NA non-coding upstream 71988 13138061 ~ 13138286 (+)
G2298012 NA non-coding upstream 108069 13101992 ~ 13102205 (+)
G2298126 NA non-coding downstream 1577 13212136 ~ 13212359 (+)
G2298129 NA non-coding downstream 3735 13214294 ~ 13214580 (+)
G2298211 NA non-coding downstream 110982 13321541 ~ 13321947 (+)
G2298275 NA non-coding downstream 211486 13422045 ~ 13423420 (+)
G2298312 NA non-coding downstream 273105 13483664 ~ 13484596 (+)
G2296450 NA other upstream 1292134 11915196 ~ 11977297 (+)
LOC110487932 LOC106570557 other upstream 1301608 11906205 ~ 11910366 (+)
G2296278 NA other upstream 1645684 11563547 ~ 11564590 (+)
G2296150 LOC106570575 other upstream 1919971 11285493 ~ 11290303 (+)
LOC110487904 snrpd1 other upstream 2688967 10509464 ~ 10521398 (+)
G2298390 NA other downstream 419503 13630062 ~ 13630795 (+)
G2298739 NA other downstream 542708 13753267 ~ 13753517 (+)
G2298884 NA other downstream 803673 14014232 ~ 14015587 (+)
LOC118936620 LOC106570515 other downstream 996607 14207166 ~ 14225549 (+)
G2299191 NA other downstream 1093177 14303736 ~ 14304232 (+)

Expression


Co-expression Network