G2298129


Basic Information

Item Value
gene id G2298129
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 13214294 ~ 13214580 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2628898
tggggatgccgtctgggtctgcagccttgcgagggttaacacgtttaaatgttttactcacgtcggctgcagtgatggagtgtccgcatgttttggttgcgggccgtgtcagtggcactgtattgtcctcaaagctggcaaaaaagttatttagtctgcctgggagcaagacatcctggtccgttaCGGGGGTAGTTTTCTTTTTgcaatctgtgattgactgtagaccctgccacatacctcttgtgtctgagccgttgaattgcgactctactttgtctctatac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2628898 True 287 lncRNA 0.49 1 13214294 13214580

Neighbor

gene id symbol gene type direction distance location
LOC110487937 LOC106588828 coding upstream 742046 12425043 ~ 12472248 (+)
col8a2 LOC106570550 coding upstream 800145 12322871 ~ 12414149 (+)
LOC110487924 LOC106570549 coding upstream 1060557 12146678 ~ 12153737 (+)
LOC110489380 LOC106570560 coding upstream 1101833 11983291 ~ 12112461 (+)
LOC110487934 LOC106570559 coding upstream 1255215 11931558 ~ 11959079 (+)
LOC118946451 adgrb2 coding downstream 59640 13274220 ~ 13491588 (+)
LOC110487938 adgrb2 coding downstream 293008 13507588 ~ 13724989 (+)
LOC110487940 LOC106588839 coding downstream 636395 13850975 ~ 14003434 (+)
LOC110487944 LOC106570514 coding downstream 930421 14145001 ~ 14175807 (+)
LOC110487945 cbx3 coding downstream 963739 14178319 ~ 14187277 (+)
G2298126 NA non-coding upstream 1935 13212136 ~ 13212359 (+)
G2298125 NA non-coding upstream 3735 13210274 ~ 13210559 (+)
G2298121 NA non-coding upstream 7062 13207018 ~ 13207232 (+)
G2298117 NA non-coding upstream 11652 13202400 ~ 13202642 (+)
G2298069 NA non-coding upstream 56806 13157060 ~ 13157488 (+)
G2298211 NA non-coding downstream 106961 13321541 ~ 13321947 (+)
G2298275 NA non-coding downstream 207465 13422045 ~ 13423420 (+)
G2298312 NA non-coding downstream 269084 13483664 ~ 13484596 (+)
G2298313 NA non-coding downstream 270451 13485031 ~ 13485463 (+)
G2298360 NA non-coding downstream 363681 13578261 ~ 13578491 (+)
G2296450 NA other upstream 1296154 11915196 ~ 11977297 (+)
LOC110487932 LOC106570557 other upstream 1305628 11906205 ~ 11910366 (+)
G2296278 NA other upstream 1649704 11563547 ~ 11564590 (+)
G2296150 LOC106570575 other upstream 1923991 11285493 ~ 11290303 (+)
LOC110487904 snrpd1 other upstream 2692987 10509464 ~ 10521398 (+)
G2298390 NA other downstream 415482 13630062 ~ 13630795 (+)
G2298739 NA other downstream 538687 13753267 ~ 13753517 (+)
G2298884 NA other downstream 799652 14014232 ~ 14015587 (+)
LOC118936620 LOC106570515 other downstream 992586 14207166 ~ 14225549 (+)
G2299191 NA other downstream 1089156 14303736 ~ 14304232 (+)

Expression


Co-expression Network