G2298381


Basic Information

Item Value
gene id G2298381
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 13609324 ~ 13609617 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2629174
gaacatttcagcgagacaactcaaaggccaAATCCATCCTCTGAAGGATTATCCCCTTTTTTGTAAATTTTCACCtataatgacatacccaaatctaactgcctgaagctcaggccctgaatcaaggatatgcatattcttgataccatttgaaaggaaacactttgaagtttatggaaatgtgaaattaatgtaggagaatataacacaatatatctggtaaaagataatacaaagaaaaaacaacttttcttttgtatttgttttgtacaaatacaatgaattccattatct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2629174 True 294 lncRNA 0.32 1 13609324 13609617

Neighbor

gene id symbol gene type direction distance location
LOC118946451 adgrb2 coding upstream 117736 13274220 ~ 13491588 (+)
LOC110487937 LOC106588828 coding upstream 1137076 12425043 ~ 12472248 (+)
col8a2 LOC106570550 coding upstream 1195175 12322871 ~ 12414149 (+)
LOC110487924 LOC106570549 coding upstream 1455587 12146678 ~ 12153737 (+)
LOC110489380 LOC106570560 coding upstream 1496863 11983291 ~ 12112461 (+)
LOC110487940 LOC106588839 coding downstream 241358 13850975 ~ 14003434 (+)
LOC110487944 LOC106570514 coding downstream 535384 14145001 ~ 14175807 (+)
LOC110487945 cbx3 coding downstream 568702 14178319 ~ 14187277 (+)
LOC118936620 LOC106570515 coding downstream 597756 14207166 ~ 14225549 (+)
LOC110487946 LOC106570515 coding downstream 633140 14242757 ~ 14260096 (+)
G2298372 NA non-coding upstream 14720 13594355 ~ 13594604 (+)
G2298370 NA non-coding upstream 16527 13592556 ~ 13592797 (+)
G2298367 NA non-coding upstream 22265 13586852 ~ 13587059 (+)
G2298360 NA non-coding upstream 30833 13578261 ~ 13578491 (+)
G2298313 NA non-coding upstream 123861 13485031 ~ 13485463 (+)
G2298384 NA non-coding downstream 7371 13616988 ~ 13617193 (+)
G2298385 NA non-coding downstream 9667 13619284 ~ 13619497 (+)
G2298387 LOC105030512 non-coding downstream 12600 13622217 ~ 13622469 (+)
G2298392 NA non-coding downstream 18729 13628346 ~ 13629099 (+)
G2298400 NA non-coding downstream 40291 13649908 ~ 13650113 (+)
G2296450 NA other upstream 1691184 11915196 ~ 11977297 (+)
LOC110487932 LOC106570557 other upstream 1700658 11906205 ~ 11910366 (+)
G2296278 NA other upstream 2044734 11563547 ~ 11564590 (+)
G2296150 LOC106570575 other upstream 2319021 11285493 ~ 11290303 (+)
LOC110487904 snrpd1 other upstream 3088017 10509464 ~ 10521398 (+)
G2298390 NA other downstream 20445 13630062 ~ 13630795 (+)
G2298739 NA other downstream 143650 13753267 ~ 13753517 (+)
G2298884 NA other downstream 404615 14014232 ~ 14015587 (+)
G2299191 NA other downstream 694119 14303736 ~ 14304232 (+)

Expression


Co-expression Network