G2298385


Basic Information

Item Value
gene id G2298385
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 13619284 ~ 13619497 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2629178
TAATAGTACTTAATTTGCTGACATAATCACAGCTTTGTAAATTACATGAATATTTCACAACCAAACTCATAAAGGACCCtttctttgacacacacacacacacacacacacacacacccacacacacactctgcatagAGGTCAATATCCCAAGGAAGAACACTGCAGCACAGAAGCAGTGAAATGGCTATATTGTCAAGGGGATGTTCTCTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2629178 True 214 lncRNA 0.40 1 13619284 13619497

Neighbor

gene id symbol gene type direction distance location
LOC118946451 adgrb2 coding upstream 127696 13274220 ~ 13491588 (+)
LOC110487937 LOC106588828 coding upstream 1147036 12425043 ~ 12472248 (+)
col8a2 LOC106570550 coding upstream 1205135 12322871 ~ 12414149 (+)
LOC110487924 LOC106570549 coding upstream 1465547 12146678 ~ 12153737 (+)
LOC110489380 LOC106570560 coding upstream 1506823 11983291 ~ 12112461 (+)
LOC110487940 LOC106588839 coding downstream 231478 13850975 ~ 14003434 (+)
LOC110487944 LOC106570514 coding downstream 525504 14145001 ~ 14175807 (+)
LOC110487945 cbx3 coding downstream 558822 14178319 ~ 14187277 (+)
LOC118936620 LOC106570515 coding downstream 587876 14207166 ~ 14225549 (+)
LOC110487946 LOC106570515 coding downstream 623260 14242757 ~ 14260096 (+)
G2298384 NA non-coding upstream 2091 13616988 ~ 13617193 (+)
G2298381 NA non-coding upstream 9667 13609324 ~ 13609617 (+)
G2298372 NA non-coding upstream 24680 13594355 ~ 13594604 (+)
G2298370 NA non-coding upstream 26487 13592556 ~ 13592797 (+)
G2298367 NA non-coding upstream 32225 13586852 ~ 13587059 (+)
G2298387 LOC105030512 non-coding downstream 2720 13622217 ~ 13622469 (+)
G2298392 NA non-coding downstream 8849 13628346 ~ 13629099 (+)
G2298400 NA non-coding downstream 30411 13649908 ~ 13650113 (+)
G2298401 NA non-coding downstream 30820 13650317 ~ 13650619 (+)
G2298403 NA non-coding downstream 33001 13652498 ~ 13652734 (+)
G2296450 NA other upstream 1701144 11915196 ~ 11977297 (+)
LOC110487932 LOC106570557 other upstream 1710618 11906205 ~ 11910366 (+)
G2296278 NA other upstream 2054694 11563547 ~ 11564590 (+)
G2296150 LOC106570575 other upstream 2328981 11285493 ~ 11290303 (+)
LOC110487904 snrpd1 other upstream 3097977 10509464 ~ 10521398 (+)
G2298390 NA other downstream 10565 13630062 ~ 13630795 (+)
G2298739 NA other downstream 133770 13753267 ~ 13753517 (+)
G2298884 NA other downstream 394735 14014232 ~ 14015587 (+)
G2299191 NA other downstream 684239 14303736 ~ 14304232 (+)

Expression


Co-expression Network