XLOC_004185 (klhdc7a)


Basic Information

Item Value
gene id XLOC_004185
gene name klhdc7a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 28633717 ~ 28639498 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00008007
CATGCAAAGTaatctcttttcttttttaacattcaCATGAATTGCAGTTTAAGCTTTTCATGTATTAAAGGATTAGGTCTAAAGCCTAGGTGGGAGAGGTGGTTTTTATGGGCTTAATAAAATCTGGAAGATAGGCCCCTTGCCATTTCAGCTCTCACTTCCAACactcaaagaaaaaaatatatataaacacactacGTTAAGAACTTTTTGCTATATTGATTATGGCAGGCGCTCTTTGTACACAAACttgaagtaaaatattaaatgttcagATTCAGCTGCTTTTCATGTGCATTTAATGATCTTTAGAAGTCTTATGGTACAACAAACAATTAATGCTATTATAATGTGTATCGACTCATTCTTATAGTCttttcaaaaaaatgttacattaaaactTGCATTATATTGACTACAAGTTGACTACAAATTCACTACAAGTTAAATTGCTCTTTAAACAACTTTCTCAAACAATGCTGTTTTAAACTTCAGTCTTAATGTGATtaataataaagtgtgtgtgtgcagattttACCAGTAATAAGTCACCATAAGTGTAGAAAGAAAGCTCATTATATACGTGCAGAAATAGCCTGTTATCTTATCAGAATGCAATAGTAGTGATTTATTTCGTTTGGATCCTCTCTGAAAATTAAACCACCAGGAATCCATTACAGAGGTCTCAGCATAATCTATTGTATCTTTTGTAACTCATATGTTTAGGTTGCTTTATTTGTGCTGTACCATAAACCAATGCCAACCATGGCTAAAGCTCATCTGAATTATTTAGTATGGCTTTAACTTGTTACATTGACACCTACTATAAGATTCAGTCTATTATAAATTTGTCCGCACTATGTTGCCAAATCTATTGTTTCTGCATCCAAAACTCCTCATTTGACACATGATATGTGGAGCAGAGGGGCAGTAGACATTCATGACTCTTCTGTCAATTATTCAGGAGTAAGCTTGCAGGTTCAGGTTTCCTTACTGCAGCTAAGACAGGCTATCACATAGCAAAACAATGTCTGTGTCCTAAAAGGACAGCATTCAGTCTAGCAAAGTGTTTATGGCCCTTCTGATAATTTCACTGATGGCAATTCGACCATATTTAAGGTGTTAGAAGTGATCTTGCTTTTCACACAGTTCTCTTTTGAAGCTATGCAAATAATGCTTTTGGCAAATGCAAAGCAACCTAATGTCATCTTTTAAAGCCTTGCTAATCAACAACACTGTGTTCATGGGAAAGAACTTTGATCCTCAGCATTTACTGTGCAAACAGTAGCATCCTGTTCATACATTCATATTTGTGTAATTGATGTAGTATATCAGCAAACACCACCTCTTAAGTAAATATACTTTCTTCATTCTCACCGATTATATTTGCAATAGTCAAGCTATTTTCATAGTTAAATAGACATATCATAATTTAAAACAAGATAATCTGGTAGACAATGCACAATTTGCATGTCTTATCTATTATGGACTGTGCTTTCTTTACACTGGAAGAAGCCAGCttcatatataataaaatataagctattttcataattaaaataaattctgagATCTCTGAGGAGGGTTACATAAGCATTCAAAGCCACTGTGTTGTGTTTTCTTAGTGATCACCTGCACCAGGTGGAATGATACCTGTCCCCGCCCTCAGAGAACACAGGATGCAAATGCTGTTGTTGTACATATCAGGTTTTAGTCACCCTGTGGGAGGAGAGGCAGCTGACAGTGTGCTTCTACTTGCAGATACTAAAAGACAAGCCCACACTGGCTGAGATACTCAAGGGAAGAGGCTCCAAATAAAATCCAATGTCCAGCAGATGACCATAGATTTCACTACAGAGATGCCAATTGCGGAATTGCTTGGAGTGCACTTTGACATGCAGCTCCTGGGTAAACTGACCTTGTCTGTGGCCACCATGCTGTTTGTTTCCTTGGTTTTCAGATTCTACAACTCCAGGGCACGAAACAGAAGGCAAGAAAGGATTCAACGGGGTGCACAAGCAACCCAAGGAAGCAACGGTGCCTACAACAGAGAGCAAAAACAACAGAGCGAAGATGCAAAGGAGGAAAATTATATTCAACAATCTTCAGAAAAACTCTTGGAGGAAAGTGTTAAAAATGCTAGTGCTGCATTGGAAGGGGGTCAACCGGAAACTATGGACATGGACACTTGTCCAAACGGGGAAACTACAGGTAAAATCAACACAGTTGATAATATACACGAgccaacaaaaaacaaaccaagaCTGACCTTACAGCTTCCTGATGTGACTGAAAAAGGACCCGGTAGTCCAAGTGGTCGGCGATCGCCATGCCTGGTAAAGAAGCTAACAGGTGGTACAGGTGTTGGCAGGGAGTTAAGACAAGATGTTGGTCACCAAGGCATGTACTCAAGTTTTCAATCAAAAGCAGAAATCAAAGTAGAGAATGCTGACCTTATCCTGGATGGGTCAAGAGATGGTAGAACAGGTGTTCACGGGAAGATCTATGAGTACTATGTGGAGTCATCTTCTCATTTCATCTCAGATTTAAGCCCCACCCGCTCTGTCAATCCAGCCTATGGTCAAAACGAAAGCACTTCGTTTAAATCCCAATCACTGGATTTATCTCATTTCAAGGAACGCTCCCGATCACCAAGTCCACAGCCTTCTAGATTCTTAATGAGAGACCTTAACATTACTCCGCGATTTACTAATGAGCCTCCCTCAACGTTCAAGCCAGAGACAGTGAGATACAGCAGGCATGTAGTCATCCGTCAGGACAGCTATCTTACTGCTGCTATTGACTCTGAGCTTCCAATCCCCTTGCCCACACAAAGGACTTTAACTCCTCGCAGCTTTTCTCCAGCTCGACCCAGTGACACCCCTTCAAGCCCATTAGAGTCTGACATAGCAAACCTTGATGACCCTGAGGAACCACAAGTGGAGACTCTAGCCGGAGcaaaattcatacattttccAGAGAACGTGGGGAACGCAGAACTCGAGAGTCTAACAGGGAAGCTGGATTTAGGCAACTGCTTGGAGGCTTTAACACTTGCTAAAAAACATGGCCACACCGCCCTTCAGCAAGCTGCTCTCCGTGTCATGTCTGATAATTACCTCCAGGTCTTTAGAGACCCAGGCCTCTTTGGCAGGCTGAAAGCAGGGGAGCGTGATCACATCCAAACACAACGCATGAGAGGAAGGAAGTGGTTAGTGGTCGCAGATATGGAGTCCCCAGACTGGAGTAGACGTCTGTCACAGTCTACAGATTTGGAGTCTGAATCAGTTAAGACATCTAACGGAATGTATTACTATGATGATTATAAGGACACATGGCACCTGCATTCCCACATTCCCCAGGAAGTGTTATCTAAAGGTTGTGCCATGTGCACCATGGATAATTATCTATTTATCGCTGTGGGTTTCCAAGGCCAGGACCGTGAAGCAACCCCTTCAAAGAAAGTTTACTGTTACAACCCAGTGACTTCAATTTGGAGTGAAATAAGCCCCATGAATGAGGCAAGGCCTCACTGCAAACTTGTAGCTCTGCAAGGCCATCTTTATGCCATTGGAGGGGAATGCTTATCAACAGTTGAGCGATATGACCCCAGGACTAACCGATGGACTTTTGTGGCACCTCTTCCTAATGAAACATTTGCCGTAGCTCATCGTGCCACAGCTTGCAATGGTGAACTGTTTGTTGCAGGGGGCACATTAAGATACACCCTCTTGCGCTACAATCCCAAAACTAACACATGGCGAGAGAGCATGATTGTCGGCAGCAGGGACAAGACTGCAGAACTGTTAGCAGTGAAGAACTTCTTATACCGTTTTGACGTCAATCCCCTTGGCATCAGCGTGTATCGCTTCCATGCAGTGGCAAGACTTTGGTATGAATGCTCCACAATACGCCTCCCCTATTGCACTGCCTTTCAATGTGTGCCTATGGACAATATTATCTACTGCGTGAGCCGTCAATTTACCTTGAGGTTCCTTGCAGATGAGGTATCTCCAAGCTTTGTTGCACAGGATTTGAAAGTACTATCCCCGGTTAAAGGCATTTTGTTTCCGTTCGTCCTTGTGCTGCCCGAAAGGACCACTCAACAAACTTGTGTTTAAGTAAGGTCAAGGTTTTctggttagaacaaaaacacTCAGGAACACATTATGCACATGTTAAAGGAATGTACCTTTTCTTAATTAGTGGCAATCGAGATGAAATATCAAGGCCATTACATCCAATTATTTTAAAGCTAGTACACAATTACACAGCACTTACTGATAAATAAATCTGTTGTCGCAGTGAAggctatttatttgtttggacCTTTCAACCACTCAGATGTCTAAATCAGACGTTAAATCCTGGAAATGTCTTGCGCAAGTGCTTAAAATGTTTCAGTAAATATACAGCTTTTGAAACACTGTGTGGATAATGTTAACCAATCAATAGTGTGTGTAGAATAAAGCCGAATTGTAATTGCAGAGCTGGCATCATAAACAACATGAATGGCTGCCATTACCACAATTTATGTAAGCTGGCTAATTATATTCATAGCTTCTTTCTTTcataatctttattattattattttgcatatcACATGTAATTAATCTACCAgcgttttaaaatatgtattacatgtcatttaaatatttaaatatatttgtatgcatttttcATGACACCAAGTCTTGACACCGGGATGggattttatttaatgcatgatgtctaattttatgttaaatctttGAACTCTTTTCAAAGAACTTCTTTTACATCACTGAATCACTTTGGGGAGTCCAGAGGCAAAAGTTTATCTTCTCCTTGTATATACCATTCCACATTATAGAAAGAACTAATGACTTAATGGGATGCTTTGCCTCTCCGTGCACATTTCTGTCTCTATCTTCTGAAGAGCTGGGAATAAAAATTCTCTCATCTATTATAAGTGAGTCTTGGTTCTTGTGTTAGACTTCAATAAATAATGAGTTCTGACAAAATGTGAGTTGCAGCAAGAGACGTTCGTGTGACCAGGATCTTAATTAAATTTAAACGCAATTACGCTGTCAAAACCAAAGCAATCACATAATCAATTTATGTTAATGAAAGTATACAATACAATCACCGTGACAATCGCGTATGCATATGTGATCAAAGAAAGCAGGCGTGCAGAGGAGAGTGTGCTGTGATGCAATTCCCAGTGACGTATCCTTGCTCTGTGTAACTCTAGCACCATCATGTGGTGGGAGATGATATCAAGGTCTGAAAATGGAATCCGTACACGGCTAATATGCTGCACTGAATGACGGTGACAAATGCAAAAAGACACATAGCCGGAGCGTTCCAAAGGCTAGCAGAAGAACGCAGTGGGATAAAAACCAACACAGCAGGAGAAGTGTGAACACAGATGGTTGGACGTCAAATATAGCGTCCGTTTGCTTGTAATTAAACACTTGGATTCAACATAATTAAACACTTAATGGGATGGGAGTTAGGAAAGTCCCCTTGGAATCTGTCTATGAATGACTCGGCTATCTAAACTAGCTCTGTGGTCTGACTGAACTGTTGATTCTGCTTGCAGCGCTATTTTAGTGCGTTAATGAAGGACGTCATTAGTAAGAGATTTTGCTGGTCATCTTTTGGTTACAGGCACAttaaattgcactagagtgtgcTTAAAAATAGACCTACAtggagcaaacaaataaaaaggaaAGTCTGTCAGAtggaaatataaaaaacaacaacaacatagctTTTAAATATTGATAGACCATT

Function

symbol description
klhdc7a Orthologous to human KLHDC7A (kelch domain containing 7A).

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-160114-44 Orthologous to human KLHDC7A (kelch domain containing 7A).

Ensembl:

ensembl_id ENSDARG00000105322

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00008007 True 5782 mRNA 0.40 1 28633717 28639498

Neighbor

gene id symbol gene type direction distance location
XLOC_004184 dhrs3b coding downstream 19109 28590733 ~ 28614608 (-)
XLOC_004183 BX649345.1 coding downstream 108221 28522364 ~ 28525496 (-)
XLOC_004182 NA coding downstream 111373 28513742 ~ 28522344 (-)
XLOC_004181 NA coding downstream 209576 28418876 ~ 28424141 (-)
XLOC_004179 lactbl1b coding downstream 243616 28127199 ~ 28390101 (-)
XLOC_004186 igsf21a coding upstream 3415 28642913 ~ 29082429 (-)
XLOC_004187 NA coding upstream 445868 29085366 ~ 29088626 (-)
XLOC_004188 NA coding upstream 460429 29099927 ~ 29319919 (-)
XLOC_004189 arhgef10la coding upstream 691644 29331142 ~ 29563437 (-)
XLOC_004190 NA coding upstream 898484 29537982 ~ 29544989 (-)
XLOC_004063 CR854846.1 misc downstream 12506039 16127382 ~ 16127678 (-)
XLOC_004019 CR450764.8 misc downstream 15942026 12691395 ~ 12691691 (-)
XLOC_004015 CR450764.4 misc downstream 16011950 12621518 ~ 12621767 (-)
XLOC_004013 CABZ01022569.1 misc downstream 16042421 12590999 ~ 12591296 (-)
XLOC_004008 BX000700.19 misc downstream 16120455 12512966 ~ 12513262 (-)
XLOC_004180 NA non-coding downstream 433213 28196957 ~ 28200504 (-)
XLOC_004174 NA non-coding downstream 824002 27800859 ~ 27809715 (-)
XLOC_004193 NA non-coding upstream 1095080 29734578 ~ 29737247 (-)
XLOC_004198 CU652893.1 non-coding upstream 1321616 29961114 ~ 29961901 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000306_04870702_04872912 KLHDC7A coding CI01000306 null 4870528 ~ 4872937 (-)