G2298401


Basic Information

Item Value
gene id G2298401
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 13650317 ~ 13650619 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2629195
ctctccttcttcctctctatttcttcctctctccctcttcctctctctctctcttcctctctccctcttcctctctccctcttcatctctctctcttcctctctccctctccctctctctcttcctccctctctcttcctctctcgttattcctccctctctccctcttgctctctctctcttcctctctcgttattcctccctctctccctcttcctctctctctcttcctctcgccttgttcctctctctctcttcctctctgtctcttcctctctctctcttcctctctctctcttcctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2629195 True 303 lncRNA 0.52 1 13650317 13650619

Neighbor

gene id symbol gene type direction distance location
LOC118946451 adgrb2 coding upstream 158729 13274220 ~ 13491588 (+)
LOC110487937 LOC106588828 coding upstream 1178069 12425043 ~ 12472248 (+)
col8a2 LOC106570550 coding upstream 1236168 12322871 ~ 12414149 (+)
LOC110487924 LOC106570549 coding upstream 1496580 12146678 ~ 12153737 (+)
LOC110489380 LOC106570560 coding upstream 1537856 11983291 ~ 12112461 (+)
LOC110487940 LOC106588839 coding downstream 200356 13850975 ~ 14003434 (+)
LOC110487944 LOC106570514 coding downstream 494382 14145001 ~ 14175807 (+)
LOC110487945 cbx3 coding downstream 527700 14178319 ~ 14187277 (+)
LOC118936620 LOC106570515 coding downstream 556754 14207166 ~ 14225549 (+)
LOC110487946 LOC106570515 coding downstream 592138 14242757 ~ 14260096 (+)
G2298400 NA non-coding upstream 204 13649908 ~ 13650113 (+)
G2298392 NA non-coding upstream 21218 13628346 ~ 13629099 (+)
G2298387 LOC105030512 non-coding upstream 27848 13622217 ~ 13622469 (+)
G2298385 NA non-coding upstream 30820 13619284 ~ 13619497 (+)
G2298384 NA non-coding upstream 33124 13616988 ~ 13617193 (+)
G2298403 NA non-coding downstream 1879 13652498 ~ 13652734 (+)
G2298408 NA non-coding downstream 16831 13667450 ~ 13667672 (+)
G2298409 NA non-coding downstream 18129 13668748 ~ 13668974 (+)
G2298416 NA non-coding downstream 31286 13681905 ~ 13682124 (+)
LOC110487938 adgrb2 non-coding downstream 34055 13507588 ~ 13724989 (+)
G2298390 NA other upstream 19522 13630062 ~ 13630795 (+)
G2296450 NA other upstream 1732177 11915196 ~ 11977297 (+)
LOC110487932 LOC106570557 other upstream 1741651 11906205 ~ 11910366 (+)
G2296278 NA other upstream 2085727 11563547 ~ 11564590 (+)
G2296150 LOC106570575 other upstream 2360014 11285493 ~ 11290303 (+)
G2298739 NA other downstream 102648 13753267 ~ 13753517 (+)
G2298884 NA other downstream 363613 14014232 ~ 14015587 (+)
G2299191 NA other downstream 653117 14303736 ~ 14304232 (+)
G2299272 NA other downstream 768042 14418661 ~ 14419677 (+)

Expression


Co-expression Network