G2298408


Basic Information

Item Value
gene id G2298408
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 13667450 ~ 13667672 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2629202
AGATGATCAAACATTCGCAAGATAATATATTTGTTTGTAAAGGTTACATACTCAATTAACACGTGTAGAGTACTGTATGTATGAACATAGCCTAATCTCTATGATAGTCTTAATGTAGCTAAACTCATTTTAAAACTACAATAAAGACTTTCACCtaccttcctccctttctccctcctccactacttccctccctcctcctctacttccctccctcctcctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2629202 True 223 lncRNA 0.39 1 13667450 13667672

Neighbor

gene id symbol gene type direction distance location
LOC118946451 adgrb2 coding upstream 175862 13274220 ~ 13491588 (+)
LOC110487937 LOC106588828 coding upstream 1195202 12425043 ~ 12472248 (+)
col8a2 LOC106570550 coding upstream 1253301 12322871 ~ 12414149 (+)
LOC110487924 LOC106570549 coding upstream 1513713 12146678 ~ 12153737 (+)
LOC110489380 LOC106570560 coding upstream 1554989 11983291 ~ 12112461 (+)
LOC110487940 LOC106588839 coding downstream 183303 13850975 ~ 14003434 (+)
LOC110487944 LOC106570514 coding downstream 477329 14145001 ~ 14175807 (+)
LOC110487945 cbx3 coding downstream 510647 14178319 ~ 14187277 (+)
LOC118936620 LOC106570515 coding downstream 539701 14207166 ~ 14225549 (+)
LOC110487946 LOC106570515 coding downstream 575085 14242757 ~ 14260096 (+)
G2298403 NA non-coding upstream 14716 13652498 ~ 13652734 (+)
G2298401 NA non-coding upstream 16831 13650317 ~ 13650619 (+)
G2298400 NA non-coding upstream 17337 13649908 ~ 13650113 (+)
G2298392 NA non-coding upstream 38351 13628346 ~ 13629099 (+)
G2298387 LOC105030512 non-coding upstream 44981 13622217 ~ 13622469 (+)
G2298409 NA non-coding downstream 1076 13668748 ~ 13668974 (+)
G2298416 NA non-coding downstream 14233 13681905 ~ 13682124 (+)
LOC110487938 adgrb2 non-coding downstream 17002 13507588 ~ 13724989 (+)
G2298421 NA non-coding downstream 27817 13695489 ~ 13695691 (+)
G2298425 NA non-coding downstream 35718 13703390 ~ 13703744 (+)
G2298390 NA other upstream 36655 13630062 ~ 13630795 (+)
G2296450 NA other upstream 1749310 11915196 ~ 11977297 (+)
LOC110487932 LOC106570557 other upstream 1758784 11906205 ~ 11910366 (+)
G2296278 NA other upstream 2102860 11563547 ~ 11564590 (+)
G2296150 LOC106570575 other upstream 2377147 11285493 ~ 11290303 (+)
G2298739 NA other downstream 85595 13753267 ~ 13753517 (+)
G2298884 NA other downstream 346560 14014232 ~ 14015587 (+)
G2299191 NA other downstream 636064 14303736 ~ 14304232 (+)
G2299272 NA other downstream 750989 14418661 ~ 14419677 (+)

Expression


Co-expression Network