G2299172


Basic Information

Item Value
gene id G2299172
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 14277933 ~ 14278233 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2630100
cttcaactatgacagacaaaatgagaaaaaaaatccagaaaatcacattgtaggatttttaatttatttatttgcaaattatggtggaaaataagtatttggtcacctacaaacaagcaagatttctggctctcacagacctgtaacttcttctttaagaggctcctctgtcctccactcgttacctgtatcaatgtcacctgtttgaacttgttatcagtataaaagacacctgtccacaacctcaaacagttacactccaaactccactatggccaagaccaaagagctgtcaaaggac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2630100 True 301 lncRNA 0.38 1 14277933 14278233

Neighbor

gene id symbol gene type direction distance location
LOC110487946 LOC106570515 coding upstream 17837 14242757 ~ 14260096 (+)
LOC118936620 LOC106570515 coding upstream 52384 14207166 ~ 14225549 (+)
LOC110487945 cbx3 coding upstream 90656 14178319 ~ 14187277 (+)
LOC110487944 LOC106570514 coding upstream 102126 14145001 ~ 14175807 (+)
LOC110487940 LOC106588839 coding upstream 276212 13850975 ~ 14003434 (+)
LOC110487954 NA coding downstream 144219 14422452 ~ 14424543 (+)
LOC110487953 NA coding downstream 157672 14435905 ~ 14437911 (+)
LOC110489442 LOC106570521 coding downstream 235380 14513613 ~ 14517978 (+)
LOC110489384 LOC106570524 coding downstream 304691 14582924 ~ 14638903 (+)
LOC110487967 LOC106570526 coding downstream 409679 14687912 ~ 14726969 (+)
G2299166 NA non-coding upstream 3822 14273846 ~ 14274111 (+)
G2299161 NA non-coding upstream 13409 14264085 ~ 14264524 (+)
G2298916 NA non-coding upstream 198047 14078459 ~ 14079886 (+)
G2298882 NA non-coding upstream 265758 14011554 ~ 14012175 (+)
G2299208 NA non-coding downstream 54844 14333077 ~ 14333310 (+)
G2299209 NA non-coding downstream 56231 14334464 ~ 14334700 (+)
G2299266 LOC106609167 non-coding downstream 118635 14396868 ~ 14397290 (+)
G2299275 NA non-coding downstream 137426 14415659 ~ 14416343 (+)
G2299276 NA non-coding downstream 145230 14423463 ~ 14423815 (+)
G2298884 NA other upstream 262346 14014232 ~ 14015587 (+)
G2298739 NA other upstream 524416 13753267 ~ 13753517 (+)
G2298390 NA other upstream 647138 13630062 ~ 13630795 (+)
G2296450 NA other upstream 2359793 11915196 ~ 11977297 (+)
G2299191 NA other downstream 25503 14303736 ~ 14304232 (+)
G2299272 NA other downstream 140428 14418661 ~ 14419677 (+)
G2299643 trmt13 other downstream 745400 15023633 ~ 15028263 (+)

Expression


Co-expression Network