G2299422


Basic Information

Item Value
gene id G2299422
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 14638968 ~ 14642798 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2630383
GGCTAatgttctctttattttttatgTAATAGTGTTCACATTTATGAAGCAGCAGCTTATGTAAAAACAGTTTGATATAGTACACAGGTCTCCTTCCTCACACCCTCTGTTGCCTCCGTACAAATAGGAAACATTGTTCTCCACTTAACATATGAAAATATAATTTAAACGCACTTGacacacattacaatacattcactgtACACAATATATCAGAATAGTCCCCCTCACACACGCTTGTACTGTACTCCTCACATCCCCGCTGTGTAATACTGTCAGGCTCCCTTTTAAACTGTAACCATAGTGACCTGCATCTCTGCGGGGAGAGGCCAGGTTTATAAGTGTTTGACAGATCGCAAACTCTGGTCTCTGTCCCCTCGCCAAAATGCGCTGGAGCCAAGGCTTCCAAGTACTGAAAACCTGGCACAGACTCCAGAACGCGTTCTGTACAGCCACAATCAAAAACAATGCTACCTTCCTCTTTCTCGTAtgctgggcctgtattcacatagtgtctcagtaggagtggtgttctaggatcaggtccccgcTCGTATTCATTATGGTTTCAAAGGCTTCTGTTATTAGCGAGGCacttactctgagacgctttgtgaatacaggtGCACTTTGCCACACCCATGTCAAGGGTTGTTATGGCAACAGTCAAgcgtgtgtgttggggtaccatcAGACTCAGACCATTATCACAGTACAGAACAGGTTAGAAATGTTTTTGGGCCTGGCACGGGGTAACATTTTCCCAACGGACACCACTTTTTAACACTACACCACCACTCTGCTGTACTCTGAAGGCATGGTATCACAAATAGGCCAGAACATGCTTACCTTGACACAATTTGACAGTACATCAGACTGCTTCTGTAAAGCAGGAGGCTATGGGCAAGGTCCTGGTTATGACactatctgcatcccaaatggcattccaTAGGTAGTGCACTttatggaatagggtgtcatttaaaACACAGAACTCATCTAAAATGTCACTATTCCCCGTATACaaaaatagggtgtcatttgagacagcCGTATATTATAACACTATGGAGGACTGTAACAGAAGGCGGAATAATAACACAAGAAGCTGAAAAGCTCAGATACTGCAGAAAGACTTGGCTAAGaagcaacacactcacacagactgtACTGGAATGCTGTAGTCTACAACGCAAGGCAATAAAAGTTTGTAGGTGTAATCTCTGGAGATACACCCTAagacaaacacatgcacaaaaacaaaacataccatcgacacacacacacacacactggaggcgCAATGAGACCCGTGTTCTCTTGACACGCGTGCGCACCTCTTTGATGAAACCGTATgacagtctctctccccctcccccctcaggcACATGGTAATGTAAATGTTTGGCAGTAGAGAGCTGTTGGCAATGATCATGGAAAAGTAACCAGAAACAATACTTGGCAACTGGAATAGAATAGAGCATGATGCCTCATCTGGTCTGCTCACACTACAGTCTGGAATAACCTAGAATACAGGATGATGCCTCATCTGGTCTGCTCACATTACAGTCTGGAATAACCTAGAATACAGGATGATGCCTCATCTGGTCTGCTCACACTACAGTCTGGAATAACCTAGAATACAGGATGATGCCTCATCTGGTCTGCTCACACTACAGTCTGGAATAACCTAGAATACAGGATGATGCCTCATCTGGTCTGCTCACACTACAGTCTGGAATAACCTAGAATACAGGATGCACAATCCATTCTGAAATCATAGAACCGTTCTAGAACAGAGGGAATGAAGAAATGCAATAGTTTCCTTGTTTCTCTATATGGGCTGAACACTAACATGAAATCTGTGCATTAAAATCAATCagaattgtgaaaaatgtatttaGGGACGCAGATCTGAAGTTAGGATTCAAGCCGTAGTCTCTTTGTTTTTGCTGCTGGGGATATCTAGAACTGAGGTCACCTAGCTGTTTAAAGTTTGACCTATGACAACAGGACAGGTTGTCTCGGGGTTGAGGAATGGAAGAAAAACGTATTGATGAAATATCAAAAGAAAATAATATCTGGAAAATATATCGAAAaagaatataaaaaaataaagctTGAAAGTAAAGTGAAACTACTTAGTATATGCTGATGAATActtatatttgtatatatacacacacatctattgtttatatatctatatatagactGTATAATCCAAGTCAACATCCACACCTTCCTCCTTCTCTTTTACAttactcctcttcctcttctgttttgttttttctttctttttcttttctttgtTTTCATTTTGTTAGCACCGTATGTCAATACAAAAAGTCACGCAAATAGTTGGGATAGCATGAGAATGTGCAAATGtacaaacaacaaaaaaagccTAGAAAGATGCATATTATTAAAATAAGAGAGTAACATGTGAAAACCAAAGAACATAATACAAGACATAAACAAGTTAAAGCATGCTCTAGATCCTTTAGTGTGTGGGAGgaagggataggggtttaggttGTCACCCCTAAGGTTGGGCTAgaagggataggggtttaggttGTCACCCCTAAGGTTGGGCCAgaagggataggggtttaggttGTCACCCCTAAGGTTGGGCCAGAAGGGATAGGGGTTTGGGTTGTCACCCCTAAGGTTGGGCCAGAAGGGATAGGGGTTTGGGTTGTCACCCCTAAGGTTGGGCCAGAAGGGATAGGGATATGTTTTGGTTGGTTGGTCAAGGTGGGGTGGGGTGGATATTGACATTGAAAAAGTGTATGGTGGTTGGGGTTGGGAGTGCTGGTGAGGAATagggaaatgtttatttttatttttctagcCCTGCATCTTGCGGATGATGTCGGCGGAGACAGGCGGGTGGAAGTTGATGGTGTGGTGTCTCAGGCCCTGGGACGTCTTGTAGCTCTTCCCACAGCGGCACTTGAAGGGCTTCCGCACACGGATCTGTGTCCGGTGGCCGTTCTTGGCATGGTATTTAATACCGTTC
>TU2630384
GGCTAatgttctctttattttttatgTAATAGTGTTCACATTTATGAAGCAGCAGCTTATGTAAAAACAGTTTGATATAGTACACAGGTCTCCTTCCTCACACCCTCTGTTGCCTCCGTACAAATAGGAAACATTGTTCTCCACTTAACATATGAAAATATAATTTAAACGCACTTGacacacattacaatacattcactgtACACAATATATCAGAATAGTCCCCCTCACACACGCTTGTACTGTACTCCTCACATCCCCGCTGTGTAATACTGTCAGGCTCCCTTTTAAACTGTAACCATAGTGACCTGCATCTCTGCGGGGAGAGGCCAGGTTTATAAGTGTTTGACAGATCGCAAACTCTGGTCTCTGTCCCCTCGCCAAAATGCGCTGGAGCCAAGGCTTCCAAGTACTGAAAACCTGGCACAGACTCCAGAACGCGTTCTGTACAGCCACAATCAAAAACAATGCTACCTTCCTCTTTCTCGTAtgctgggcctgtattcacatagtgtctcagtaggagtggtgttctaggatcaggtccccgcTCGTATTCATTATGGTTTCAAAGGCTTCTGTTATTAGCGAGGCacttactctgagacgctttgtgaatacaggtGCACTTTGCCACACCCATGTCAAGGGTTGTTATGGCAACAGTCAAgcgtgtgtgttggggtaccatcAGACTCAGACCATTATCACAGTACAGAACAGGTTAGAAATGTTTTTGGGCCTGGCACGGGGTAACATTTTCCCAACGGACACCACTTTTTAACACTACACCACCACTCTGCTGTACTCTGAAGGCATGGTATCACAAATAGGCCAGAACATGCTTACCTTGACACAATTTGACAGTACATCAGACTGCTTCTGTAAAGCAGGAGGCTATGGGCAAGGTCCTGGTTATGACactatctgcatcccaaatggcattccaTAGGTAGTGCACTttatggaatagggtgtcatttaaaACACAGAACTCATCTAAAATGTCACTATTCCCCGTATACaaaaatagggtgtcatttgagacagcCGTATATTATAACACTATGGAGGACTGTAACAGAAGGCGGAATAATAACACAAGAAGCTGAAAAGCTCAGATACTGCAGAAAGACTTGGCTAAGaagcaacacactcacacagactgtACTGGAATGCTGTAGTCTACAACGCAAGGCAATAAAAGTTTGTAGGTGTAATCTCTGGAGATACACCCTAagacaaacacatgcacaaaaacaaaacataccatcgacacacacacacacacactggaggcgCAATGAGACCCGTGTTCTCTTGACACGCGTGCGCACCTCTTTGATGAAACCGTATgacagtctctctccccctcccccctcaggcACATGGTAATGTAAATGTTTGGCAGTAGAGAGCTGTTGGCAATGATCATGGAAAAGTAACCAGAAACAATACTTGGCAACTGGAATAGAATAGAGCATGATGCCTCATCTGGTCTGCTCACACTACAGTCTGGAATAACCTAGAATACAGGATGATGCCTCATCTGGTCTGCTCACATTACAGTCTGGAATAACCTAGAATACAGGATGATGCCTCATCTGGTCTGCTCACACTACAGTCTGGAATAACCTAGAATACAGGATGATGCCTCATCTGGTCTGCTCACACTACAGTCTGGAATAACCTAGAATACAGGATGATGCCTCATCTGGTCTGCTCACACTACAGTCTGGAATAACCTAGAATACAGGATGCACAATCCATTCTGAAATCATAGAACCGTTCTAGAACAGAGGGAATGAAGAAATGCAATAGTTTCCTTGTTTCTCTATATGGGCTGAACACTAACATGAAATCTGTGCATTAAAATCAATCagaattgtgaaaaatgtatttaGGGACGCAGATCTGAAGTTAGGATTCAAGCCGTAGTCTCTTTGTTTTTGCTGCTGGGGATATCTAGAACTGAGGTCACCTAGCTGTTTAAAGTTTGACCTATGACAACAGGACAGGTTGTCTCGGGGTTGAGGAATGGAAGAAAAACGTATTGATGAAATATCAAAAGAAAATAATATCTGGAAAATATATCGAAAaagaatataaaaaaataaagctTGAAAGTAAAGTGAAACTACTTAGTATATGCTGATGAATActtatatttgtatatatacacacacatctattgtttatatatctatatatagactGTATAATCCAAGTCAACATCCACACCTTCCTCCTTCTCTTTTACAttactcctcttcctcttctgttttgttttttctttctttttcttttctttgtTTTCATTTTGTTAGCACCGTATGTCAATACAAAAAGTCACGCAAATAGTTGGGATAGCATGAGAATGTGCAAATGtacaaacaacaaaaaaagccTAGAAAGATGCATATTATTAAAATAAGAGAGTAACATGTGAAAACCAAAGAACATAATACAAGACATAAACAAGTTAAAGCATGCTCTAGATCCTTTAGTGTGTGGGAGgaagggataggggtttaggttGTCACCCCTAAGGTTGGGCTAgaagggataggggtttaggttGTCACCCCTAAGGTTGGGCCAgaagggataggggtttaggttGTCACCCCTAAGGTTGGGCCAGAAGGAATAGGGGTTTGGGTTGTCACCCCTAAGGTTGGGCCAGAAGGGATAGGGGTTTGGGTTGTCACCCCTAAGGTTGGGCCAGAAGGGATAGGGGTTTGGGTTGTCACCCCTAAGGTTGGGCCAGAAGGGATAGGGATATGTTTTGGTTGGTTGGTCAAGGTGGGGTGGGGTGGATATTGACATTGAAAAAGTGTATGGTGGTTGGGGTTGGGAGTGCTGGTGAGGAATagggaaatgtttatttttatttttctagcCCTGCATCTTGCGGATGATGTCGGCGGAGACAGGCGGGTGGAAGTTGATGGTGTGGTGTCTCAGGCCCTGGGACGTCTTGTAGCTCTTCCCACAGCGGCACTTGAAGGGCTTCCGCACACGGATCTGTGTCCGGTGGCCGTTCTTGGCATGGTATTTAATACCGTTC
>TU2630385
GGCTAatgttctctttattttttatgTAATAGTGTTCACATTTATGAAGCAGCAGCTTATGTAAAAACAGTTTGATATAGTACACAGGTCTCCTTCCTCACACCCTCTGTTGCCTCCGTACAAATAGGAAACATTGTTCTCCACTTAACATATGAAAATATAATTTAAACGCACTTGacacacattacaatacattcactgtACACAATATATCAGAATAGTCCCCCTCACACACGCTTGTACTGTACTCCTCACATCCCCGCTGTGTAATACTGTCAGGCTCCCTTTTAAACTGTAACCATAGTGACCTGCATCTCTGCGGGGAGAGGCCAGGTTTATAAGTGTTTGACAGATCGCAAACTCTGGTCTCTGTCCCCTCGCCAAAATGCGCTGGAGCCAAGGCTTCCAAGTACTGAAAACCTGGCACAGACTCCAGAACGCGTTCTGTACAGCCACAATCAAAAACAATGCTACCTTCCTCTTTCTCGTAtgctgggcctgtattcacatagtgtctcagtaggagtggtgttctaggatcaggtccccgcTCGTATTCATTATGGTTTCAAAGGCTTCTGTTATTAGCGAGGCacttactctgagacgctttgtgaatacaggtGCACTTTGCCACACCCATGTCAAGGGTTGTTATGGCAACAGTCAAgcgtgtgtgttggggtaccatcAGACTCAGACCATTATCACAGTACAGAACAGGTTAGAAATGTTTTTGGGCCTGGCACGGGGTAACATTTTCCCAACGGACACCACTTTTTAACACTACACCACCACTCTGCTGTACTCTGAAGGCATGGTATCACAAATAGGCCAGAACATGCTTACCTTGACACAATTTGACAGTACATCAGACTGCTTCTGTAAAGCAGGAGGCTATGGGCAAGGTCCTGGTTATGACactatctgcatcccaaatggcattccaTAGGTAGTGCACTttatggaatagggtgtcatttaaaACACAGAACTCATCTAAAATGTCACTATTCCCCGTATACaaaaatagggtgtcatttgagacagcCGTATATTATAACACTATGGAGGACTGTAACAGAAGGCGGAATAATAACACAAGAAGCTGAAAAGCTCAGATACTGCAGAAAGACTTGGCTAAGaagcaacacactcacacagactgtACTGGAATGCTGTAGTCTACAACGCAAGGCAATAAAAGTTTGTAGGTGTAATCTCTGGAGATACACCCTAagacaaacacatgcacaaaaacaaaacataccatcgacacacacacacacacactggaggcgCAATGAGACCCGTGTTCTCTTGACACGCGTGCGCACCTCTTTGATGAAACCGTATgacagtctctctccccctcccccctcaggcACATGGTAATGTAAATGTTTGGCAGTAGAGAGCTGTTGGCAATGATCATGGAAAAGTAACCAGAAACAATACTTGGCAACTGGAATAGAATAGAGCATGATGCCTCATCTGGTCTGCTCACACTACAGTCTGGAATAACCTAGAATACAGGATGATGCCTCATCTGGTCTGCTCACATTACAGTCTGGAATAACCTAGAATACAGGATGATGCCTCATCTGGTCTGCTCACACTACAGTCTGGAATAACCTAGAATACAGGATGATGCCTCATCTGGTCTGCTCACACTACAGTCTGGAATAACCTAGAATACAGGATGATGCCTCATCTGGTCTGCTCACACTACAGTCTGGAATAACCTAGAATACAGGATGCACAATCCATTCTGAAATCATAGAACCGTTCTAGAACAGAGGGAATGAAGAAATGCAATAGTTTCCTTGTTTCTCTATATGGGCTGAACACTAACATGAAATCTGTGCATTAAAATCAATCagaattgtgaaaaatgtatttaGGGACGCAGATCTGAAGTTAGGATTCAAGCCGTAGTCTCTTTGTTTTTGCTGCTGGGGATATCTAGAACTGAGGTCACCTAGCTGTTTAAAGTTTGACCTATGACAACAGGACAGGTTGTCTCGGGGTTGAGGAATGGAAGAAAAACGTATTGATGAAATATCAAAAGAAAATAATATCTGGAAAATATATCGAAAaagaatataaaaaaataaagctTGAAAGTAAAGTGAAACTACTTAGTATATGCTGATGAATActtatatttgtatatatacacacacatctattgtttatatatctatatatagactGTATAATCCAAGTCAACATCCACACCTTCCTCCTTCTCTTTTACAttactcctcttcctcttctgttttgttttttctttctttttcttttctttgtTTTCATTTTGTTAGCACCGTATGTCAATACAAAAAGTCACGCAAATAGTTGGGATAGCATGAGAATGTGCAAATGtacaaacaacaaaaaaagccTAGAAAGATGCATATTATTAAAATAAGAGAGTAACATGTGAAAACCAAAGAACATAATACAAGACATAAACAAGTTAAAGCATGCTCTAGATCCTTTAGTGTGTGGGAGgaagggataggggtttaggttGTCACCCCTAAGGTTGGGCTAgaagggataggggtttaggttGTCACCCCTAAGGTTGGGCCAgaagggataggggtttaggttGTCACCCCTAAGGTTGGGCTAGAAGGGATAGGGGTTTGGGTTATCACCCTTAaggttacatgctgaccagactgcATGTGCGTCTGCGTGCGTCATTGtatgttgattttgtccccccacaccagacgctaatcaggacacgcaggttgaaatatcaaaacaagcCATggaccaactatattaatttgggagACAGGTCGAAAAGTATTAAACATTTTTgccaatagctagctagcttactgttgcaggctaatttgtcctgggatataaacactgggttgttattttacctgaaatgcacaaggtcctctactctgacaattaatccacacataaaagggtaaaccgagttagtttctagtaatctctcctccttcagcctTCTTTTTCTGATTTTATATGGCgcttggcaaccaactttaaggcgCATTACCACAACagactggactggagtgtggacctcagttcatctttcaatcacccacgtgagcatatgctcctaaaaacaaatgaaatgggagaggcgggacttgcagtgcgttaagcatcacaaatagaacagACACCAGCAGTGTGGGTGTAATGACTGAATGACATGGatctgtacatttattttgcaacgtgggcggtgtggtcagcatatTAAGGTTGGGCCAGAAGGGATAGGGGTTTGGGTTGTCACCCCTAAGGTTGGGCCAGAAGGGATAGGGGTTTGGGTTGTCACCCCTAAGGTTGGGCCAGAAGGGATAGGGATATGTTTTGGTTGGTTGGTCAAGGTGGGGTGGGGTGGATATTGACATTGAAAAAGTGTATGGTGGTTGGGGTTGGGAGTGCTGGTGAGGAATagggaaatgtttatttttatttttctagcCCTGCATCTTGCGGATGATGTCGGCGGAGACAGGCGGGTGGAAGTTGATGGTGTGGTGTCTCAGGCCCTGGGACGTCTTGTAGCTCTTCCCACAGCGGCACTTGAAGGGCTTCCGCACACGGATCTGTGTCCGGTGGCCGTTCTTGGCATGGTATTTAATACCGTTC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2630383 False 3028 lncRNA 0.43 3 14638968 14642798
TU2630384 False 3070 lncRNA 0.43 3 14638968 14642798
TU2630385 True 3663 lncRNA 0.43 3 14638968 14642798

Neighbor

gene id symbol gene type direction distance location
LOC110489384 LOC106570524 coding upstream 66 14582924 ~ 14638903 (+)
LOC110489442 LOC106570521 coding upstream 120990 14513613 ~ 14517978 (+)
LOC110487953 NA coding upstream 201057 14435905 ~ 14437911 (+)
LOC110487954 NA coding upstream 214425 14422452 ~ 14424543 (+)
LOC110487946 LOC106570515 coding upstream 378872 14242757 ~ 14260096 (+)
LOC110487967 LOC106570526 coding downstream 45114 14687912 ~ 14726969 (+)
LOC110487969 LOC106570528 coding downstream 118314 14761112 ~ 14793523 (+)
LOC110487970 LOC106570529 coding downstream 155147 14797945 ~ 14807978 (+)
LOC110487973 LOC106570532 coding downstream 252878 14895676 ~ 14908383 (+)
LOC110487974 LOC106570531 coding downstream 269519 14912317 ~ 14918635 (+)
G2299450 NA non-coding upstream 37731 14600580 ~ 14601237 (+)
G2299391 NA non-coding upstream 123107 14515632 ~ 14515861 (+)
G2299310 NA non-coding upstream 147904 14488439 ~ 14491064 (+)
G2299316 NA non-coding upstream 156546 14482217 ~ 14482422 (+)
G2299315 NA non-coding upstream 159873 14478887 ~ 14479095 (+)
G2299500 NA non-coding downstream 94166 14736964 ~ 14739942 (+)
G2299515 NA non-coding downstream 98964 14741762 ~ 14741971 (+)
G2299517 NA non-coding downstream 101436 14744234 ~ 14744449 (+)
G2299518 NA non-coding downstream 104728 14747526 ~ 14747746 (+)
G2299520 NA non-coding downstream 107245 14750043 ~ 14750577 (+)
G2299272 NA other upstream 219291 14418661 ~ 14419677 (+)
G2299191 NA other upstream 334736 14303736 ~ 14304232 (+)
LOC118936620 LOC106570515 other upstream 415091 14207166 ~ 14225549 (+)
G2299643 trmt13 other downstream 380835 15023633 ~ 15028263 (+)
LOC110487981 LOC106570537 other downstream 489469 15131738 ~ 15188805 (+)
G2300167 NA other downstream 774428 15417226 ~ 15417507 (+)
G2300406 NA other downstream 1237883 15880681 ~ 15882161 (+)
dss1 NA other downstream 1560675 16203473 ~ 16252597 (+)

Expression


Co-expression Network