Gene
RNA
| Item | Value |
|---|---|
| gene id | G2299536 |
| gene name | LOC106570530 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 14814211 ~ 14817276 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2630521 | False | 273 | lncRNA | 0.54 | 3 | 14814211 | 14817276 |
| TU2630522 | True | 343 | lncRNA | 0.47 | 2 | 14814211 | 14814780 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487970 | LOC106570529 | coding | upstream | 6233 | 14797945 ~ 14807978 (+) |
| LOC110487969 | LOC106570528 | coding | upstream | 20688 | 14761112 ~ 14793523 (+) |
| LOC110487967 | LOC106570526 | coding | upstream | 87242 | 14687912 ~ 14726969 (+) |
| LOC110489384 | LOC106570524 | coding | upstream | 175309 | 14582924 ~ 14638903 (+) |
| LOC110489442 | LOC106570521 | coding | upstream | 296233 | 14513613 ~ 14517978 (+) |
| LOC110487973 | LOC106570532 | coding | downstream | 78400 | 14895676 ~ 14908383 (+) |
| LOC110487974 | LOC106570531 | coding | downstream | 95041 | 14912317 ~ 14918635 (+) |
| LOC110487975 | LOC106570533 | coding | downstream | 116367 | 14933643 ~ 14972153 (+) |
| LOC118946541 | NA | coding | downstream | 199748 | 15017024 ~ 15017839 (+) |
| LOC118946527 | NA | coding | downstream | 202262 | 15019538 ~ 15023593 (+) |
| G2299531 | NA | non-coding | upstream | 25467 | 14788308 ~ 14788744 (+) |
| G2299521 | NA | non-coding | upstream | 59757 | 14754139 ~ 14754454 (+) |
| G2299520 | NA | non-coding | upstream | 63634 | 14750043 ~ 14750577 (+) |
| G2299518 | NA | non-coding | upstream | 66465 | 14747526 ~ 14747746 (+) |
| G2299517 | NA | non-coding | upstream | 69762 | 14744234 ~ 14744449 (+) |
| G2299541 | NA | non-coding | downstream | 5299 | 14822575 ~ 14824876 (+) |
| G2299577 | NA | non-coding | downstream | 62543 | 14879819 ~ 14880418 (+) |
| G2299601 | NA | non-coding | downstream | 104119 | 14921395 ~ 14922723 (+) |
| G2299609 | NA | non-coding | downstream | 113203 | 14930479 ~ 14930721 (+) |
| G2299610 | NA | non-coding | downstream | 113610 | 14930886 ~ 14931294 (+) |
| G2299272 | NA | other | upstream | 394534 | 14418661 ~ 14419677 (+) |
| G2299191 | NA | other | upstream | 509979 | 14303736 ~ 14304232 (+) |
| LOC118936620 | LOC106570515 | other | upstream | 590334 | 14207166 ~ 14225549 (+) |
| G2299643 | trmt13 | other | downstream | 206357 | 15023633 ~ 15028263 (+) |
| LOC110487981 | LOC106570537 | other | downstream | 314991 | 15131738 ~ 15188805 (+) |
| G2300167 | NA | other | downstream | 599950 | 15417226 ~ 15417507 (+) |
| G2300406 | NA | other | downstream | 1063405 | 15880681 ~ 15882161 (+) |
| dss1 | NA | other | downstream | 1386197 | 16203473 ~ 16252597 (+) |
