G2299478


Basic Information

Item Value
gene id G2299478
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 15047730 ~ 15048936 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2630447
gagaggttggagtctctttgattgagtgtgtggacaggtgtcttttatacaggtaacgagttcaaacaggtgcagttaatacaggtaatgagtggagaacaggatggcTTCTCAATGGCCAGCTTCTCCATGAACTCCTGGCAACGGAGGTTGAAGTTTGTCTTCACAATAAGCATGGCCTTGATGGTAGGAACAGTGAATCTATTTCGTGCTGCTGTCCATAGAGCATTCATTTGGGAGAACACTCTCTCGACTGGTGCATTACTTCCAGGTAAGCACATGACAACAGACGCTAATCTAGCCAGGTTAGTGTGTGGGATGTCATTCACTTTGAAGTCGTTAACCACCGTGCTCCATCTCTGACTGAGCTGTGTCTCAGATGTTTTCCATTCTTCAAGCGATCCCCCCTTTAGGAACTCTTGCAGGCCAGTAACCTTGTCACACAATGTATCCTCATTGATGGTCACATTGGGGCATTTTTCCTGCAGTGTGCCCGCTGCCTTCATGCAGAGGTTGCCTTTTtaaaaggagacaatgtaaaTCTTTTAGATTATCTGTGTGCTTTCCCCATGCTTGCAAGTAGTTCACAGCTGTAGTGAAGAATGATTGGGATGTTTTGAGAAAGCTCTCTTTAGACATGATACCATTTTCCTCTAGCTCTCTCAAAGTCCTCTGACCAAAACTGTAATGAAGTTGTCACATCAGTCAATTTTACCTCAACGTTTCTCAGAATTGCAGCGGACTCCACAGCACAGTGGTCCTGGCCTCCAAGCATCTTTATCGTGTCACTGAATACGGTCAAGTTTCCATGGACAAAGGCCAGCCAAAGTTCAGTCAGTGGATCTTCGAACATTGTTCACAGGGCATTTGTCTTCAGAAATAAAGGATTTCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2630447 True 892 lncRNA 0.45 2 15047730 15048936

Neighbor

gene id symbol gene type direction distance location
LOC110487978 oxnad1 coding upstream 1341 15035150 ~ 15046389 (+)
LOC118946527 NA coding upstream 24137 15019538 ~ 15023593 (+)
LOC118946541 NA coding upstream 29891 15017024 ~ 15017839 (+)
LOC110487975 LOC106570533 coding upstream 75577 14933643 ~ 14972153 (+)
LOC110487974 LOC106570531 coding upstream 129095 14912317 ~ 14918635 (+)
LOC110487981 LOC106570537 coding downstream 82802 15131738 ~ 15188805 (+)
LOC110489387 LOC106588864 coding downstream 281131 15330067 ~ 15398500 (+)
LOC118946488 LOC106570510 coding downstream 355794 15404730 ~ 15413624 (+)
LOC110487983 LOC106570504 coding downstream 396511 15445447 ~ 15455152 (+)
LOC110487984 LOC106570503 coding downstream 409759 15458695 ~ 15474470 (+)
G2299646 NA non-coding upstream 14475 15032960 ~ 15033255 (+)
G2299645 NA non-coding upstream 15258 15032253 ~ 15032472 (+)
G2299644 NA non-coding upstream 15810 15031695 ~ 15031920 (+)
G2299643 trmt13 non-coding upstream 19467 15023633 ~ 15028263 (+)
G2299479 NA non-coding downstream 775 15049711 ~ 15070727 (+)
G2299652 NA non-coding downstream 10286 15059222 ~ 15060165 (+)
G2299666 NA non-coding downstream 23403 15072339 ~ 15073669 (+)
G2299670 NA non-coding downstream 38318 15087254 ~ 15087495 (+)
G2299671 NA non-coding downstream 43412 15092348 ~ 15092563 (+)
LOC110489384 LOC106570524 other upstream 408827 14582924 ~ 14638903 (+)
LOC110489442 LOC106570521 other upstream 532296 14513613 ~ 14517978 (+)
G2299272 NA other upstream 628053 14418661 ~ 14419677 (+)
G2299191 NA other upstream 743498 14303736 ~ 14304232 (+)
G2300167 NA other downstream 368290 15417226 ~ 15417507 (+)
G2300406 NA other downstream 831745 15880681 ~ 15882161 (+)
dss1 NA other downstream 1154537 16203473 ~ 16252597 (+)
G2301452 NA other downstream 1475574 16524510 ~ 16525394 (+)

Expression


Co-expression Network