G2300065


Basic Information

Item Value
gene id G2300065
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 15244751 ~ 15245308 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2631146
atatacacgaggtacctgtaccgagtcgatgtgcaggggtacgtggtaataacatggctatatacacaaagtacctgtaccgagtcgatgtgctgaggtacgaggtaataacttggctatatacatgaggtacctgtaccgagtcgatgtgctgaggtacgaggtaataacttggctatatacacgaggtacctgtaccgagtcgatgtgctggggtacgaggtaataacttggctatatacacgaggtacctgtaccgagtcgatgtgctggggtacgaggtaataacttggctatatacacgaggtacctgtaccgagtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2631146 True 322 lncRNA 0.48 2 15244751 15245308

Neighbor

gene id symbol gene type direction distance location
LOC110487981 LOC106570537 coding upstream 55967 15131738 ~ 15188805 (+)
LOC110487978 oxnad1 coding upstream 198362 15035150 ~ 15046389 (+)
LOC118946527 NA coding upstream 221158 15019538 ~ 15023593 (+)
LOC118946541 NA coding upstream 226912 15017024 ~ 15017839 (+)
LOC110487975 LOC106570533 coding upstream 272598 14933643 ~ 14972153 (+)
LOC110489387 LOC106588864 coding downstream 84759 15330067 ~ 15398500 (+)
LOC118946488 LOC106570510 coding downstream 159422 15404730 ~ 15413624 (+)
LOC110487983 LOC106570504 coding downstream 200139 15445447 ~ 15455152 (+)
LOC110487984 LOC106570503 coding downstream 213387 15458695 ~ 15474470 (+)
LOC110487988 LOC106570500 coding downstream 362320 15607628 ~ 15610456 (+)
G2300038 NA non-coding upstream 38358 15206023 ~ 15206393 (+)
G2300030 NA non-coding upstream 70448 15172240 ~ 15174303 (+)
G2300029 NA non-coding upstream 80995 15163541 ~ 15163756 (+)
G2300028 NA non-coding upstream 83152 15160442 ~ 15161599 (+)
G2300072 NA non-coding downstream 7744 15253052 ~ 15254677 (+)
G2300087 NA non-coding downstream 39439 15284747 ~ 15293802 (+)
G2300152 NA non-coding downstream 138149 15383457 ~ 15386018 (+)
G2300126 NA non-coding downstream 149114 15394422 ~ 15395052 (+)
G2299643 trmt13 other upstream 217619 15023633 ~ 15028263 (+)
LOC110489384 LOC106570524 other upstream 605848 14582924 ~ 14638903 (+)
LOC110489442 LOC106570521 other upstream 729317 14513613 ~ 14517978 (+)
G2299272 NA other upstream 825074 14418661 ~ 14419677 (+)
G2300167 NA other downstream 171918 15417226 ~ 15417507 (+)
G2300406 NA other downstream 635373 15880681 ~ 15882161 (+)
dss1 NA other downstream 958165 16203473 ~ 16252597 (+)
G2301452 NA other downstream 1279202 16524510 ~ 16525394 (+)
LOC110488017 LOC106570464 other downstream 1391231 16603599 ~ 16639641 (+)

Expression


Co-expression Network