Gene
RNA
| Item | Value |
|---|---|
| gene id | G2300087 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 15284747 ~ 15293802 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2631170 | True | 753 | lncRNA | 0.43 | 4 | 15284747 | 15293802 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487981 | LOC106570537 | coding | upstream | 95963 | 15131738 ~ 15188805 (+) |
| LOC110487978 | oxnad1 | coding | upstream | 238358 | 15035150 ~ 15046389 (+) |
| LOC118946527 | NA | coding | upstream | 261154 | 15019538 ~ 15023593 (+) |
| LOC118946541 | NA | coding | upstream | 266908 | 15017024 ~ 15017839 (+) |
| LOC110487975 | LOC106570533 | coding | upstream | 312594 | 14933643 ~ 14972153 (+) |
| LOC110489387 | LOC106588864 | coding | downstream | 36265 | 15330067 ~ 15398500 (+) |
| LOC118946488 | LOC106570510 | coding | downstream | 110928 | 15404730 ~ 15413624 (+) |
| LOC110487983 | LOC106570504 | coding | downstream | 151645 | 15445447 ~ 15455152 (+) |
| LOC110487984 | LOC106570503 | coding | downstream | 164893 | 15458695 ~ 15474470 (+) |
| LOC110487988 | LOC106570500 | coding | downstream | 313826 | 15607628 ~ 15610456 (+) |
| G2300072 | NA | non-coding | upstream | 30070 | 15253052 ~ 15254677 (+) |
| G2300065 | NA | non-coding | upstream | 39439 | 15244751 ~ 15245308 (+) |
| G2300038 | NA | non-coding | upstream | 78354 | 15206023 ~ 15206393 (+) |
| G2300030 | NA | non-coding | upstream | 110444 | 15172240 ~ 15174303 (+) |
| G2300152 | NA | non-coding | downstream | 89655 | 15383457 ~ 15386018 (+) |
| G2300126 | NA | non-coding | downstream | 100620 | 15394422 ~ 15395052 (+) |
| G2300180 | NA | non-coding | downstream | 145423 | 15439225 ~ 15439460 (+) |
| G2300147 | NA | non-coding | downstream | 161411 | 15455213 ~ 15458560 (+) |
| G2299643 | trmt13 | other | upstream | 257615 | 15023633 ~ 15028263 (+) |
| LOC110489384 | LOC106570524 | other | upstream | 645844 | 14582924 ~ 14638903 (+) |
| LOC110489442 | LOC106570521 | other | upstream | 769313 | 14513613 ~ 14517978 (+) |
| G2299272 | NA | other | upstream | 865070 | 14418661 ~ 14419677 (+) |
| G2300167 | NA | other | downstream | 123424 | 15417226 ~ 15417507 (+) |
| G2300406 | NA | other | downstream | 586879 | 15880681 ~ 15882161 (+) |
| dss1 | NA | other | downstream | 909671 | 16203473 ~ 16252597 (+) |
| G2301452 | NA | other | downstream | 1230708 | 16524510 ~ 16525394 (+) |
| LOC110488017 | LOC106570464 | other | downstream | 1342737 | 16603599 ~ 16639641 (+) |
