Gene
RNA
| Item | Value |
|---|---|
| gene id | G2300325 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 15699819 ~ 15700088 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2631454 | True | 270 | lncRNA | 0.41 | 1 | 15699819 | 15700088 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487988 | LOC106570500 | coding | upstream | 89363 | 15607628 ~ 15610456 (+) |
| LOC110487984 | LOC106570503 | coding | upstream | 225349 | 15458695 ~ 15474470 (+) |
| LOC110487983 | LOC106570504 | coding | upstream | 244667 | 15445447 ~ 15455152 (+) |
| LOC118946488 | LOC106570510 | coding | upstream | 286195 | 15404730 ~ 15413624 (+) |
| LOC110489387 | LOC106588864 | coding | upstream | 301319 | 15330067 ~ 15398500 (+) |
| mterf3 | LOC106570479 | coding | downstream | 350040 | 16050128 ~ 16058601 (+) |
| LOC110488002 | LOC106570481 | coding | downstream | 358756 | 16058844 ~ 16062141 (+) |
| LOC110488007 | chrc1 | coding | downstream | 393010 | 16093098 ~ 16098054 (+) |
| LOC110488010 | LOC106570474 | coding | downstream | 441203 | 16141291 ~ 16143786 (+) |
| LOC118946491 | NA | coding | downstream | 446807 | 16146868 ~ 16163427 (+) |
| G2300313 | NA | non-coding | upstream | 17482 | 15681451 ~ 15682337 (+) |
| G2300262 | NA | non-coding | upstream | 52218 | 15647047 ~ 15647601 (+) |
| G2300284 | NA | non-coding | upstream | 71604 | 15627767 ~ 15628215 (+) |
| G2300260 | NA | non-coding | upstream | 80517 | 15613852 ~ 15619302 (+) |
| G2300236 | NA | non-coding | upstream | 153873 | 15544931 ~ 15545946 (+) |
| G2300328 | NA | non-coding | downstream | 11410 | 15711498 ~ 15712156 (+) |
| G2300330 | LOC106570506 | non-coding | downstream | 14492 | 15714580 ~ 15714808 (+) |
| G2300351 | NA | non-coding | downstream | 57908 | 15757996 ~ 15758547 (+) |
| G2300390 | NA | non-coding | downstream | 117572 | 15817660 ~ 15823630 (+) |
| G2300400 | NA | non-coding | downstream | 119637 | 15819725 ~ 15820520 (+) |
| G2300167 | NA | other | upstream | 282312 | 15417226 ~ 15417507 (+) |
| LOC110487981 | LOC106570537 | other | upstream | 541278 | 15131738 ~ 15188805 (+) |
| G2299643 | trmt13 | other | upstream | 672687 | 15023633 ~ 15028263 (+) |
| LOC110489384 | LOC106570524 | other | upstream | 1060916 | 14582924 ~ 14638903 (+) |
| LOC110489442 | LOC106570521 | other | upstream | 1184385 | 14513613 ~ 14517978 (+) |
| G2300406 | NA | other | downstream | 180593 | 15880681 ~ 15882161 (+) |
| dss1 | NA | other | downstream | 503385 | 16203473 ~ 16252597 (+) |
| G2301452 | NA | other | downstream | 824422 | 16524510 ~ 16525394 (+) |
| LOC110488017 | LOC106570464 | other | downstream | 936451 | 16603599 ~ 16639641 (+) |
| G2301522 | LOC106570460 | other | downstream | 969519 | 16669607 ~ 16693934 (+) |
