Gene
RNA
| Item | Value |
|---|---|
| gene id | G2300438 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 15894723 ~ 15895034 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2631581 | True | 312 | lncRNA | 0.37 | 1 | 15894723 | 15895034 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487988 | LOC106570500 | coding | upstream | 284267 | 15607628 ~ 15610456 (+) |
| LOC110487984 | LOC106570503 | coding | upstream | 420253 | 15458695 ~ 15474470 (+) |
| LOC110487983 | LOC106570504 | coding | upstream | 439571 | 15445447 ~ 15455152 (+) |
| LOC118946488 | LOC106570510 | coding | upstream | 481099 | 15404730 ~ 15413624 (+) |
| LOC110489387 | LOC106588864 | coding | upstream | 496223 | 15330067 ~ 15398500 (+) |
| mterf3 | LOC106570479 | coding | downstream | 155094 | 16050128 ~ 16058601 (+) |
| LOC110488002 | LOC106570481 | coding | downstream | 163810 | 16058844 ~ 16062141 (+) |
| LOC110488007 | chrc1 | coding | downstream | 198064 | 16093098 ~ 16098054 (+) |
| LOC110488010 | LOC106570474 | coding | downstream | 246257 | 16141291 ~ 16143786 (+) |
| LOC118946491 | NA | coding | downstream | 251861 | 16146868 ~ 16163427 (+) |
| G2300405 | NA | non-coding | upstream | 15150 | 15879338 ~ 15879573 (+) |
| G2300394 | LOC107670052 | non-coding | upstream | 30684 | 15826576 ~ 15864039 (+) |
| G2300390 | NA | non-coding | upstream | 71093 | 15817660 ~ 15823630 (+) |
| G2300400 | NA | non-coding | upstream | 74203 | 15819725 ~ 15820520 (+) |
| G2300351 | NA | non-coding | upstream | 136176 | 15757996 ~ 15758547 (+) |
| G2300441 | NA | non-coding | downstream | 2174 | 15897208 ~ 15897409 (+) |
| G2300442 | NA | non-coding | downstream | 2968 | 15898002 ~ 15899297 (+) |
| G2300443 | NA | non-coding | downstream | 4323 | 15899357 ~ 15900387 (+) |
| G2300444 | NA | non-coding | downstream | 5396 | 15900430 ~ 15900823 (+) |
| G2300388 | NA | non-coding | downstream | 9841 | 15904875 ~ 15907953 (+) |
| G2300406 | NA | other | upstream | 12562 | 15880681 ~ 15882161 (+) |
| G2300167 | NA | other | upstream | 477216 | 15417226 ~ 15417507 (+) |
| LOC110487981 | LOC106570537 | other | upstream | 736182 | 15131738 ~ 15188805 (+) |
| G2299643 | trmt13 | other | upstream | 867591 | 15023633 ~ 15028263 (+) |
| LOC110489384 | LOC106570524 | other | upstream | 1255820 | 14582924 ~ 14638903 (+) |
| dss1 | NA | other | downstream | 308439 | 16203473 ~ 16252597 (+) |
| G2301452 | NA | other | downstream | 629476 | 16524510 ~ 16525394 (+) |
| LOC110488017 | LOC106570464 | other | downstream | 741505 | 16603599 ~ 16639641 (+) |
| G2301522 | LOC106570460 | other | downstream | 774573 | 16669607 ~ 16693934 (+) |
| LOC110488019 | LOC106570458 | other | downstream | 890334 | 16785333 ~ 16788539 (+) |
