Gene
RNA
| Item | Value |
|---|---|
| gene id | G2300452 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 15920956 ~ 15921434 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2631598 | True | 479 | lncRNA | 0.38 | 1 | 15920956 | 15921434 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487988 | LOC106570500 | coding | upstream | 310500 | 15607628 ~ 15610456 (+) |
| LOC110487984 | LOC106570503 | coding | upstream | 446486 | 15458695 ~ 15474470 (+) |
| LOC110487983 | LOC106570504 | coding | upstream | 465804 | 15445447 ~ 15455152 (+) |
| LOC118946488 | LOC106570510 | coding | upstream | 507332 | 15404730 ~ 15413624 (+) |
| LOC110489387 | LOC106588864 | coding | upstream | 522456 | 15330067 ~ 15398500 (+) |
| mterf3 | LOC106570479 | coding | downstream | 128694 | 16050128 ~ 16058601 (+) |
| LOC110488002 | LOC106570481 | coding | downstream | 137410 | 16058844 ~ 16062141 (+) |
| LOC110488007 | chrc1 | coding | downstream | 171664 | 16093098 ~ 16098054 (+) |
| LOC110488010 | LOC106570474 | coding | downstream | 219857 | 16141291 ~ 16143786 (+) |
| LOC118946491 | NA | coding | downstream | 225461 | 16146868 ~ 16163427 (+) |
| G2300450 | NA | non-coding | upstream | 3996 | 15916741 ~ 15916960 (+) |
| G2300448 | NA | non-coding | upstream | 6129 | 15914623 ~ 15914827 (+) |
| G2300447 | NA | non-coding | upstream | 6723 | 15913984 ~ 15914233 (+) |
| G2300446 | NA | non-coding | upstream | 7559 | 15912559 ~ 15913397 (+) |
| G2300415 | NA | non-coding | upstream | 9589 | 15911086 ~ 15911367 (+) |
| G2300453 | NA | non-coding | downstream | 116 | 15921550 ~ 15921816 (+) |
| G2300398 | NA | non-coding | downstream | 886 | 15922320 ~ 15923289 (+) |
| G2300455 | NA | non-coding | downstream | 7054 | 15928488 ~ 15928930 (+) |
| G2300457 | NA | non-coding | downstream | 8725 | 15930159 ~ 15930373 (+) |
| G2300460 | NA | non-coding | downstream | 14710 | 15936144 ~ 15936382 (+) |
| G2300406 | NA | other | upstream | 38795 | 15880681 ~ 15882161 (+) |
| G2300167 | NA | other | upstream | 503449 | 15417226 ~ 15417507 (+) |
| LOC110487981 | LOC106570537 | other | upstream | 762415 | 15131738 ~ 15188805 (+) |
| G2299643 | trmt13 | other | upstream | 893824 | 15023633 ~ 15028263 (+) |
| LOC110489384 | LOC106570524 | other | upstream | 1282053 | 14582924 ~ 14638903 (+) |
| dss1 | NA | other | downstream | 282039 | 16203473 ~ 16252597 (+) |
| G2301452 | NA | other | downstream | 603076 | 16524510 ~ 16525394 (+) |
| LOC110488017 | LOC106570464 | other | downstream | 715105 | 16603599 ~ 16639641 (+) |
| G2301522 | LOC106570460 | other | downstream | 748173 | 16669607 ~ 16693934 (+) |
| LOC110488019 | LOC106570458 | other | downstream | 863934 | 16785333 ~ 16788539 (+) |
