G2300614


Basic Information

Item Value
gene id G2300614
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 16215859 ~ 16217260 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2631806
ACACTATAACTACACTATAACCTGTCTAgttcacactacactataccctgTATACCCTGTCTAgttcacactacactataccctgTCTAGTTTCCACCTGTTTCTCcatcacactacactataccctgTATACCCTGTCTAgttcacactacactataccctgTCTAGTTCCCACCTGTTTCTCcatcacactacactataccctgTCTAGTTCCCACCTGTTTCTCcatcacactacactataccctgTCTAgttcacactacactataccctgTCTAgttcacactacactataccctgTCTAgttcacactacactataccctgTCTAGTTCCCACCTGTTTCTCcatcacactacactataccctgTCTAgttcacactacactataccctgTCTAgttcacactacactataccctgTATACCCTGTCTAGTTCCCTTCTGTTTCTCCATCACACTACACTATAACCTGTCTAGTTTCCACCTGCTTCTCCATCACACTACACTATAACCTGTCTAGTTCCCACCTGTTTCTCcatcacactacactataccctgTCTAgttcacactacactataccctgTCTAGTTCCCACCTGTTTCTCAGTTACACTACACTATAACCTGTCTAGTTCCCACCTGTTTCTCCATCACAATACACTATACACTGTCTAGTTCCCTTCTGTTTCTCcatcacactacactataccctgTCTAgttcacactacactataccctgTCTAgttcacactacactataccctgTCTAGTTCCCACCTGTTTCTCagttacactacactataccctgTCTAGTTCCCACCTGTTTCTCagttacactacactatacactgtCTAGTTCCCTTCTGTTTCTCcatcacactacactataccctgTCTAgttcacactacactataccctgTCTAGTTCCCACCTGTTTCTCcatcacactacactataccctgTCTAGTTCCCACCTGTTTCTCagttacactacactatacactgtCTAGTTCCCTTCTGTTTCTCcatcacactacactataccctgTCTAGTTCCCACCTGTTTCTCcatcacactacactataccctgTCTAGTTCCCACCTGTTTCTCcatcacactacactataccctgTCTAgttcacactacactataccctgTCTAgttcacactacactataccctgTCTAgttcacactacactataccctgTCTAGTTCCCACCTGTTTCTCagttacactacactatacc

Function

NR:

description
PREDICTED: extensin-1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2631806 True 1255 lncRNA 0.44 3 16215859 16217260

Neighbor

gene id symbol gene type direction distance location
dss1 NA coding upstream 3022 16203473 ~ 16252597 (+)
LOC118946491 NA coding upstream 52432 16146868 ~ 16163427 (+)
LOC110488010 LOC106570474 coding upstream 72073 16141291 ~ 16143786 (+)
LOC110488007 chrc1 coding upstream 117805 16093098 ~ 16098054 (+)
LOC110488002 LOC106570481 coding upstream 153718 16058844 ~ 16062141 (+)
LOC110488013 LOC106570470 coding downstream 11313 16228573 ~ 16351043 (+)
LOC110488016 LOC106570467 coding downstream 246303 16463563 ~ 16487955 (+)
LOC110488017 LOC106570464 coding downstream 386339 16603599 ~ 16639641 (+)
LOC110488019 LOC106570458 coding downstream 568073 16785333 ~ 16788539 (+)
LOC110488022 tfpi2 coding downstream 613448 16827065 ~ 16834652 (+)
G2300553 NA non-coding upstream 124095 16091506 ~ 16091764 (+)
G2300549 NA non-coding upstream 129439 16085524 ~ 16086420 (+)
G2300488 NA non-coding upstream 210688 16004892 ~ 16005171 (+)
G2300480 NA non-coding upstream 218006 15997561 ~ 15997853 (+)
G2300663 NA non-coding downstream 101655 16318915 ~ 16319370 (+)
G2300670 NA non-coding downstream 113460 16330720 ~ 16347102 (+)
G2300671 NA non-coding downstream 119244 16336504 ~ 16342791 (+)
G2300684 LOC100380667 non-coding downstream 148139 16365399 ~ 16374326 (+)
G2300686 NA non-coding downstream 153529 16370789 ~ 16371154 (+)
G2300406 NA other upstream 333698 15880681 ~ 15882161 (+)
G2300167 NA other upstream 798352 15417226 ~ 15417507 (+)
LOC110487981 LOC106570537 other upstream 1057318 15131738 ~ 15188805 (+)
G2299643 trmt13 other upstream 1188727 15023633 ~ 15028263 (+)
LOC110489384 LOC106570524 other upstream 1576956 14582924 ~ 14638903 (+)
G2301452 NA other downstream 307250 16524510 ~ 16525394 (+)
G2301522 LOC106570460 other downstream 452347 16669607 ~ 16693934 (+)

Expression


Co-expression Network