G2300738


Basic Information

Item Value
gene id G2300738
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 16467264 ~ 16467787 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2631953
cactacagttactacagagcaggtacattaacgttataacacccctcactacagttactacagagcaggtacagtaacgttataacacccctcactacagttactacagagcaggtacagtgaTGTTATAccacccctcactacagttactacagagcaggtacaataacgttataacacccctcactacagttactacagagcaggtacagtaatgttataacacccctcactacagttactacaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2631953 True 248 lncRNA 0.42 2 16467264 16467787

Neighbor

gene id symbol gene type direction distance location
LOC110488013 LOC106570470 coding upstream 116221 16228573 ~ 16351043 (+)
dss1 NA coding upstream 254427 16203473 ~ 16252597 (+)
LOC118946491 NA coding upstream 303837 16146868 ~ 16163427 (+)
LOC110488010 LOC106570474 coding upstream 323478 16141291 ~ 16143786 (+)
LOC110488007 chrc1 coding upstream 369210 16093098 ~ 16098054 (+)
LOC110488017 LOC106570464 coding downstream 135812 16603599 ~ 16639641 (+)
LOC110488019 LOC106570458 coding downstream 317546 16785333 ~ 16788539 (+)
LOC110488022 tfpi2 coding downstream 362921 16827065 ~ 16834652 (+)
calcr LOC106588943 coding downstream 378947 16846734 ~ 16955570 (+)
LOC110488025 cdk6 coding downstream 826556 17294343 ~ 17364119 (+)
G2300701 NA non-coding upstream 1091 16465596 ~ 16466173 (+)
G2300727 NA non-coding upstream 11540 16454122 ~ 16455724 (+)
G2300716 NA non-coding upstream 37693 16425942 ~ 16429571 (+)
G2300692 NA non-coding upstream 78339 16387767 ~ 16388925 (+)
G2300684 LOC100380667 non-coding upstream 92938 16365399 ~ 16374326 (+)
G2300739 NA non-coding downstream 210 16467997 ~ 16468196 (+)
G2300740 NA non-coding downstream 6839 16474626 ~ 16474836 (+)
G2300698 NA non-coding downstream 20228 16488015 ~ 16491781 (+)
G2301422 NA non-coding downstream 24554 16492341 ~ 16492704 (+)
G2301423 LOC105030512 non-coding downstream 25031 16492818 ~ 16493177 (+)
G2300406 NA other upstream 585103 15880681 ~ 15882161 (+)
G2300167 NA other upstream 1049757 15417226 ~ 15417507 (+)
LOC110487981 LOC106570537 other upstream 1308723 15131738 ~ 15188805 (+)
G2299643 trmt13 other upstream 1440132 15023633 ~ 15028263 (+)
G2301452 NA other downstream 56723 16524510 ~ 16525394 (+)
G2301522 LOC106570460 other downstream 201820 16669607 ~ 16693934 (+)

Expression


Co-expression Network