G2300698


Basic Information

Item Value
gene id G2300698
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 16488015 ~ 16491781 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2631906
GATTCCATATAGTTTCAACTCTGAGCATTTCACCTTTTTGTTTTTTACTGCTTACAAATATTCGTCAATCTCGGAAGTTTAGACAGACGTTTATCTCCAATGTTTTTTGGGGCCTAAAGGGAATTTAGTAGAATCAACTGTAAATCTTGGTGACTCATTTTTTTGTTCTACCCTCACTTGTTGAATAAGACAAGAGCTCAAACATTCATTCAAGGTTTCCTATGAAGACAGAAAATAGATATTGAAGACATTGAGGTATCTAGTACATTTACTCTAAACCAAGTCCAACTGAGTTTAAGTATAAGTTATGTGAATATTGAGATACATTTTCTATCATTCTGTTATATTTTTCAATGACTAAAACGATTGCATTTTAGAGGCCGGCTAGGTCTTTTATACATTAAGTATTTATTGAATAACGTTGTGTGCCAGAGAGCAAAATGGGAGTATTATCACATTTCTGTCATTAGGGACACGGTAAGACTGAGTTGAATCAAATGTTTGACTGGTGCCCAGTGTGGGTATTCTTTGATGTGTTAACTGGAGCAGTCATTACAACATTTAATTTCCTGGTATACACTAAATAGTCACTATTATTACACTCCTTAGCAATAAGAAATCACATAAAAGACTATGTACACTTACTACCATTTAATCCAATAACAGCTAAGTATTTGTAACTAGTCAATATTTGTATGTGCAttgaaacaaaataaaaatagtttGAGACTAACACTGAAGTGCCAacttttatttctctctttctggttTTTAACATGTATGGTTTTAAATCACACGATCTCGGGATGTTGAAGGCATTTCATATTTTTCAATGtatcacccacccacccagtaaGTGCTGTGATGTCATATTTAACCGACCTGGGAGGAGTTATCTATCAATGGAAGTTGCTGATTGGACCTCACACGGTGGGCGGAGTCCTAACTTGAGATTATTGCACATCATTTATTATTGTTGCCGTGAATAGATGATTTACCAATATACATTATTTGGTTCTCACTCTGCCTTTTGTCCCTCTgccagggccttcagaaagtattcataccccttgacgtattccacattttgttgagttacagcctgcattcaaaatgcattaaataaataaaacatctcacccatctacacacaataccccatgataacagtgaaaacatgtttgtagaaagtttagcaaatgtatttaaaatgaaatacaggaaaatctcatttacataggtattcacaccCATGTTTCAATACAttgtagaagcacatttggcGGCGATTTCAGCTTTGAGTCATATTGGGTATGTctgatcagctttgagtcgtcttgggtatgtctgtatcagttttgagtcgtcttgggtatgtctgtatcagttttgagtcgtcttgggtatgtctgtatcagctttgagtcgtcttgggtatgtctgtatcagctttgagtcgtcttgggtatgtctgatcagctttgcacatctggatttggggattttctcccattcttccttacAGATTTTCTCAAACTCTTAAGTTAGATGGGGAAAGGCGGTGAACAgaaatcttcaagtctttccaaagattttcaataggattcaagtctgggctttggctggcacactcaaggactttcacattcttgttctgaagccattgcagcgttgctttggctgtatgcttgaggtcgttgtcctgttggtacgtaaatcttcgccccagtctgttgtttgcactctgaagcaggttcttaATGATTTgactgtatttggctccattcattgttccctgtATATCCttaagtctcccagtccctgccactgaaaagcatcccccatagcacgatgctgccaccaccatgcttcacaatagGGATGGTTTTCTTTTACACAtagcactttgcattcaggccaaataataaatgtgtctcatcagaccacatcatCCTTCAGCCTTATGACCTGTCTTTCACGTGCTGTCGtatgcctttttctcaggagtggcttccgtctggccactctcccataaagcccagcttggtgaagtgctgtagagactgttgtcctggTGGCAGggtctcccatcacagccattgaactctgaaGTAATgtctgaccaaggtccttcttgcccagtTGATCAGTTTGGTCAGCTCTAGTCTAGATggaaaaaaatatggaactatttcccaatgatggagaccactgtgctcttggaaacgttcaacactctagaaattgttttatacccttcaccagatatacagtgagcttcattttgttgttttggctctgtgcaGACTGTCAGGTTTAAGTTGAAGGTATTTTAATCTACATATGGTGAACCGGcccatattcatagcatgcaatgactacatcaagctctTCAAACTGGCTGGATGCATTTGCTATTTGTTTTAGTTGTTTGATTATCTTGTGCCCATTGGAAAATAATggtaaatgtattgtgtcattttggagtcacttttattttaaataagaatagaatatgtttctaaacatcCTAACATGTTTTACCTCCCCTGATATTGTAATGGTGAAAGGTTAGCATGtgttgggggtatgatatttgtgcatgcttggaatatgggaccaaatactcaacttttgactatttaatacacaagtgaattcgtcccaatacttttggtcccctagaATTGGGGGaacatgtacaaaaagtgctgtaatttctaaacggttcaccctatggatgaaaataccctcaaattacaGTCGGCACTTTAACCTcttagtcattgtatcatttcaaatccaaagtgctggagtacagagccaaaaccaCCAATATTTCATTATCTCAAGACTTTGAGCTTACTGTATGCCTAAAAACAATCTCAGCGAtcggacagttccttggacttcatggtatagtttctgctctgacatgccctgtcaactgtgggacttatatagacaggtgtgtttctttctaaatcatgtccaaacaaatGGATTGGCCACaggtgacatctcaaggatgatggaAGGACatttggatgcacctgagctcaatctgGAGTGTGtggaaaggggtgtgaatacttatgtaaatttgatatttctatatttcattttcaataaatttccaaaaatgtataaaaacatgtttttacttcatcgttatggggtattgtgtgtagatgaatgagaaacatattttgattattttttaattcagcctgtaacaacataatgtggaataagtcaaggggtatgaatactttctgaatgcgctgtatgtGCCTGCAGTGCTTCCATTTAGCAGCCTTTGCAAGTGCTTCAGCTTCAGTCAGAAAGTGATTATGGTAACAACAATTTCTCTCTACTAACTACAGTATTGATTCACTCCTGTATTCATTTGTTTTTTAGATTCGTTTTTCATTAAAAAAGGACCTGATTTTTAAGGGTTGATGATCAATGTTTTCCCTCATCGCTATTATTTGATCCTATCATGTTGTCAAGGCCGATTTGTTACAAACTGAATCAGAGGGGAAGGTTCTGACAGTACAGTCAAGTTTACCATGTGAATAACTGATAAGAACTACCAACTGTATCAACTACCATCGCTGAACACAGCAtaataaaacacatt

Function

NR:

description
transposase

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2631906 True 3643 lncRNA 0.38 2 16488015 16491781

Neighbor

gene id symbol gene type direction distance location
LOC110488016 LOC106570467 coding upstream 60 16463563 ~ 16487955 (+)
LOC110488013 LOC106570470 coding upstream 136972 16228573 ~ 16351043 (+)
dss1 NA coding upstream 275178 16203473 ~ 16252597 (+)
LOC118946491 NA coding upstream 324588 16146868 ~ 16163427 (+)
LOC110488010 LOC106570474 coding upstream 344229 16141291 ~ 16143786 (+)
LOC110488017 LOC106570464 coding downstream 111818 16603599 ~ 16639641 (+)
LOC110488019 LOC106570458 coding downstream 293552 16785333 ~ 16788539 (+)
LOC110488022 tfpi2 coding downstream 338927 16827065 ~ 16834652 (+)
calcr LOC106588943 coding downstream 354953 16846734 ~ 16955570 (+)
LOC110488025 cdk6 coding downstream 802562 17294343 ~ 17364119 (+)
G2300740 NA non-coding upstream 13179 16474626 ~ 16474836 (+)
G2300739 NA non-coding upstream 19819 16467997 ~ 16468196 (+)
G2300738 NA non-coding upstream 20228 16467264 ~ 16467787 (+)
G2300701 NA non-coding upstream 21842 16465596 ~ 16466173 (+)
G2300727 NA non-coding upstream 32291 16454122 ~ 16455724 (+)
G2301422 NA non-coding downstream 560 16492341 ~ 16492704 (+)
G2301423 LOC105030512 non-coding downstream 1037 16492818 ~ 16493177 (+)
G2301426 NA non-coding downstream 1534 16493315 ~ 16493821 (+)
G2301433 NA non-coding downstream 6413 16498194 ~ 16498398 (+)
G2301444 NA non-coding downstream 13686 16505467 ~ 16505696 (+)
G2300406 NA other upstream 605854 15880681 ~ 15882161 (+)
G2300167 NA other upstream 1070508 15417226 ~ 15417507 (+)
LOC110487981 LOC106570537 other upstream 1329474 15131738 ~ 15188805 (+)
G2299643 trmt13 other upstream 1460883 15023633 ~ 15028263 (+)
G2301452 NA other downstream 32729 16524510 ~ 16525394 (+)
G2301522 LOC106570460 other downstream 177826 16669607 ~ 16693934 (+)

Expression


Co-expression Network