G2301423 (LOC105030512)


Basic Information

Item Value
gene id G2301423
gene name LOC105030512
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 16492818 ~ 16493177 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2632734
tgtctggtgaggacctgccttacaacaggcctactacAAGCCATcattccagcctctctcagcctgttgTGGAGAGTCTGTTGTGGAGAGTCTGAgtctgatggagggattgtgcattcctggtgtaactcgggcagttgttgccatcctgtacctgtcctgcagatgtgatgttcggatgtaccgatcctgtgcaggtgttgttacatgtggtctgccactgcgaggacgatcagctgtccgtcctgtctccctgtagtgctgtcttaggcgtctcacagtacggacattgcaatttattgccctggccacatctgcagtcctcatgcctccttgcagcatgcctaaggcacattcacg

Function

NR:

description
uncharacterized protein LOC110529156, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2632734 True 360 lncRNA 0.53 1 16492818 16493177

Neighbor

gene id symbol gene type direction distance location
LOC110488016 LOC106570467 coding upstream 4863 16463563 ~ 16487955 (+)
LOC110488013 LOC106570470 coding upstream 141775 16228573 ~ 16351043 (+)
dss1 NA coding upstream 279981 16203473 ~ 16252597 (+)
LOC118946491 NA coding upstream 329391 16146868 ~ 16163427 (+)
LOC110488010 LOC106570474 coding upstream 349032 16141291 ~ 16143786 (+)
LOC110488017 LOC106570464 coding downstream 110422 16603599 ~ 16639641 (+)
LOC110488019 LOC106570458 coding downstream 292156 16785333 ~ 16788539 (+)
LOC110488022 tfpi2 coding downstream 337531 16827065 ~ 16834652 (+)
calcr LOC106588943 coding downstream 353557 16846734 ~ 16955570 (+)
LOC110488025 cdk6 coding downstream 801166 17294343 ~ 17364119 (+)
G2301422 NA non-coding upstream 114 16492341 ~ 16492704 (+)
G2300698 NA non-coding upstream 1037 16488015 ~ 16491781 (+)
G2300740 NA non-coding upstream 17982 16474626 ~ 16474836 (+)
G2300739 NA non-coding upstream 24622 16467997 ~ 16468196 (+)
G2300738 NA non-coding upstream 25031 16467264 ~ 16467787 (+)
G2301426 NA non-coding downstream 138 16493315 ~ 16493821 (+)
G2301433 NA non-coding downstream 5017 16498194 ~ 16498398 (+)
G2301444 NA non-coding downstream 12290 16505467 ~ 16505696 (+)
G2301448 NA non-coding downstream 17191 16510368 ~ 16511779 (+)
G2301449 NA non-coding downstream 19808 16512985 ~ 16517014 (+)
G2300406 NA other upstream 610657 15880681 ~ 15882161 (+)
G2300167 NA other upstream 1075311 15417226 ~ 15417507 (+)
LOC110487981 LOC106570537 other upstream 1334277 15131738 ~ 15188805 (+)
G2299643 trmt13 other upstream 1465686 15023633 ~ 15028263 (+)
G2301452 NA other downstream 31333 16524510 ~ 16525394 (+)
G2301522 LOC106570460 other downstream 176430 16669607 ~ 16693934 (+)

Expression


Co-expression Network