G2301444


Basic Information

Item Value
gene id G2301444
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 16505467 ~ 16505696 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2632755
CCcctgtagggagggatggaggcagggaggcaTGGAAGTAGAAAATGCCTTCAGAATCATCTGATTTTGCATTATCCAAAGACATGGCAACCTGAACATAACACGATTTGACCTGCACTGAACACTAGTATGCTTCattctattccatgttggttcaacgtaattttattgaaatgacgtggaaacaacattgattcaaccagtgtgtgcccagtgggacagtacagtag

Function

NR:

description
PREDICTED: uncharacterized protein LOC106608104

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2632755 True 230 lncRNA 0.43 1 16505467 16505696

Neighbor

gene id symbol gene type direction distance location
LOC110488016 LOC106570467 coding upstream 17512 16463563 ~ 16487955 (+)
LOC110488013 LOC106570470 coding upstream 154424 16228573 ~ 16351043 (+)
dss1 NA coding upstream 292630 16203473 ~ 16252597 (+)
LOC118946491 NA coding upstream 342040 16146868 ~ 16163427 (+)
LOC110488010 LOC106570474 coding upstream 361681 16141291 ~ 16143786 (+)
LOC110488017 LOC106570464 coding downstream 97903 16603599 ~ 16639641 (+)
LOC110488019 LOC106570458 coding downstream 279637 16785333 ~ 16788539 (+)
LOC110488022 tfpi2 coding downstream 325012 16827065 ~ 16834652 (+)
calcr LOC106588943 coding downstream 341038 16846734 ~ 16955570 (+)
LOC110488025 cdk6 coding downstream 788647 17294343 ~ 17364119 (+)
G2301433 NA non-coding upstream 7069 16498194 ~ 16498398 (+)
G2301426 NA non-coding upstream 11646 16493315 ~ 16493821 (+)
G2301423 LOC105030512 non-coding upstream 12290 16492818 ~ 16493177 (+)
G2301422 NA non-coding upstream 12763 16492341 ~ 16492704 (+)
G2300698 NA non-coding upstream 13686 16488015 ~ 16491781 (+)
G2301448 NA non-coding downstream 4672 16510368 ~ 16511779 (+)
G2301449 NA non-coding downstream 7289 16512985 ~ 16517014 (+)
G2301458 LOC106570463 non-coding downstream 27591 16533287 ~ 16541036 (+)
G2301467 NA non-coding downstream 42433 16548129 ~ 16548353 (+)
G2301536 NA non-coding downstream 154331 16660027 ~ 16660338 (+)
G2300406 NA other upstream 623306 15880681 ~ 15882161 (+)
G2300167 NA other upstream 1087960 15417226 ~ 15417507 (+)
LOC110487981 LOC106570537 other upstream 1346926 15131738 ~ 15188805 (+)
G2299643 trmt13 other upstream 1478335 15023633 ~ 15028263 (+)
G2301452 NA other downstream 18814 16524510 ~ 16525394 (+)
G2301522 LOC106570460 other downstream 163911 16669607 ~ 16693934 (+)

Expression


Co-expression Network