G2301458 (LOC106570463)


Basic Information

Item Value
gene id G2301458
gene name LOC106570463
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 16533287 ~ 16541036 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2632770
GTCTTTGATGAGTTTTTTGGCCTTGTTGTACTTCTTCTCTAGGGTGGTGTACTGGCACTGGGCCTCCTTCAGGTGCTCATTGACCGTGTGGCACAGGGTCTGGGCCTCGATCCAGTAACTCTCCAGCTTCAGCATCCTCTCCTTGTTCTCCTCCATGCTGGCCTTCAGCtggctcttctccttctcccagcgcgccttctccctctccaccacAGCAAGCTGGGATAGACAAGCACAGATAAGCATGtttcccgGTTTTtacctgccgtcctgtacctttgccccacctatctggattactgacctctgcctaccctgaccctgaccctgcctgccgtcctgtacctttgcatcacctatctggattactgacctttgcctaccctgacctgaccctgagcctgcctgctgtcctgtacctttgcatCACCTATCAGGATTACTGACCCCTGTCTGCCTTGACTTGTCTTTTGTCTGCCCCTGTTGaattaataaactgttgttaaTTTGATGTTATCTGCACCTGGGTCTCACCTGAAACGTGATACTACTTCACAACACTGCCAAATGCCATTCTAAATTCCTCTCTGATTTTCTATCTATCTAATCATGATGTGCTGGATGGCGGGGTTACATACATATATcagacatatacagtatattaccatAC

Function

NR:

description
PREDICTED: neurabin-1-like isoform X5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2632770 True 670 lncRNA 0.49 2 16533287 16541036

Neighbor

gene id symbol gene type direction distance location
LOC110488016 LOC106570467 coding upstream 45332 16463563 ~ 16487955 (+)
LOC110488013 LOC106570470 coding upstream 182244 16228573 ~ 16351043 (+)
dss1 NA coding upstream 320450 16203473 ~ 16252597 (+)
LOC118946491 NA coding upstream 369860 16146868 ~ 16163427 (+)
LOC110488010 LOC106570474 coding upstream 389501 16141291 ~ 16143786 (+)
LOC110488017 LOC106570464 coding downstream 62563 16603599 ~ 16639641 (+)
LOC110488019 LOC106570458 coding downstream 244297 16785333 ~ 16788539 (+)
LOC110488022 tfpi2 coding downstream 289672 16827065 ~ 16834652 (+)
calcr LOC106588943 coding downstream 305698 16846734 ~ 16955570 (+)
LOC110488025 cdk6 coding downstream 753307 17294343 ~ 17364119 (+)
G2301449 NA non-coding upstream 16273 16512985 ~ 16517014 (+)
G2301448 NA non-coding upstream 21508 16510368 ~ 16511779 (+)
G2301444 NA non-coding upstream 27591 16505467 ~ 16505696 (+)
G2301433 NA non-coding upstream 34889 16498194 ~ 16498398 (+)
G2301426 NA non-coding upstream 39466 16493315 ~ 16493821 (+)
G2301467 NA non-coding downstream 7093 16548129 ~ 16548353 (+)
G2301536 NA non-coding downstream 118991 16660027 ~ 16660338 (+)
G2301522 LOC106570460 non-coding downstream 128571 16669607 ~ 16693934 (+)
G2301596 NA non-coding downstream 256707 16797743 ~ 16798178 (+)
G2301452 NA other upstream 7893 16524510 ~ 16525394 (+)
G2300406 NA other upstream 651126 15880681 ~ 15882161 (+)
G2300167 NA other upstream 1115780 15417226 ~ 15417507 (+)
LOC110487981 LOC106570537 other upstream 1374746 15131738 ~ 15188805 (+)
G2301841 NA other downstream 645529 17186565 ~ 17193117 (+)

Expression


Co-expression Network