G2301610


Basic Information

Item Value
gene id G2301610
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 16806652 ~ 16806953 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2632940
agatccaggtataaatgtccagagcttgcggttgaaatccggggacatgaagagaaaaataggtccggtatgttctggtCCGAGCCGCGCCGTAAAAAACTAGcaatagattttcgagctaaaggatagctgatgaccacaaactgtggttagctgaatactaacgattagccagtaaagaagctaactatcTGATAGGTGAAGCCCATCCCCTCCTGACCAATGAGGTTCTTGCAGGGCGCGCACACGTCATCGAAGAAGACCTCGGCTGTGTCGGAAGACATCCCCGTCTTGTCGATCGT

Function

NR:

description
isovaleryl-CoA dehydrogenase, mitochondrial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2632940 True 302 lncRNA 0.49 1 16806652 16806953

Neighbor

gene id symbol gene type direction distance location
LOC110488019 LOC106570458 coding upstream 19813 16785333 ~ 16788539 (+)
LOC110488017 LOC106570464 coding upstream 169763 16603599 ~ 16639641 (+)
LOC110488016 LOC106570467 coding upstream 318697 16463563 ~ 16487955 (+)
LOC110488013 LOC106570470 coding upstream 455609 16228573 ~ 16351043 (+)
dss1 NA coding upstream 593815 16203473 ~ 16252597 (+)
LOC110488022 tfpi2 coding downstream 23755 16827065 ~ 16834652 (+)
calcr LOC106588943 coding downstream 39781 16846734 ~ 16955570 (+)
LOC110488025 cdk6 coding downstream 487390 17294343 ~ 17364119 (+)
fam133b fam133b coding downstream 561815 17368768 ~ 17374337 (+)
LOC110488030 LOC106588950 coding downstream 573216 17380169 ~ 17388113 (+)
G2301601 NA non-coding upstream 2775 16803620 ~ 16803877 (+)
G2301600 NA non-coding upstream 3079 16803281 ~ 16803573 (+)
G2301599 NA non-coding upstream 3694 16802611 ~ 16802958 (+)
G2301598 NA non-coding upstream 4246 16799363 ~ 16802406 (+)
G2301597 NA non-coding upstream 7373 16798763 ~ 16799279 (+)
G2301611 NA non-coding downstream 709 16807662 ~ 16807862 (+)
G2301617 NA non-coding downstream 6678 16813631 ~ 16814051 (+)
G2301623 NA non-coding downstream 13271 16820224 ~ 16820461 (+)
G2301625 NA non-coding downstream 15697 16822650 ~ 16822904 (+)
G2301627 NA non-coding downstream 17074 16824027 ~ 16824262 (+)
G2301522 LOC106570460 other upstream 129981 16669607 ~ 16693934 (+)
G2301452 NA other upstream 281258 16524510 ~ 16525394 (+)
G2301841 NA other downstream 379612 17186565 ~ 17193117 (+)
G2303854 hsf1b other downstream 1970392 18777345 ~ 18783027 (+)
LOC110488049 recql4 other downstream 2194389 18998633 ~ 19016439 (+)
dgat1a LOC106570407 other downstream 2547258 19354178 ~ 19379095 (+)

Expression


Co-expression Network