G2301611


Basic Information

Item Value
gene id G2301611
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 16807662 ~ 16807862 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2632941
GTGTTAATACAAGTCATTTGTTTATTGGAGAAAATTCTCACGTTAAATCCATGTATGATTATCAAGAAGCATAACTTGCGTGTCCCAAACATCATATTACTTTCGCTTTGGTCATCCATCAACATGCGGGAGGCtatattcagtagcctatatTGGTTGGACTCCCTGACCATCAATACACAGACTCCCGATGTTGTGTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2632941 True 201 lncRNA 0.39 1 16807662 16807862

Neighbor

gene id symbol gene type direction distance location
LOC110488019 LOC106570458 coding upstream 20823 16785333 ~ 16788539 (+)
LOC110488017 LOC106570464 coding upstream 170773 16603599 ~ 16639641 (+)
LOC110488016 LOC106570467 coding upstream 319707 16463563 ~ 16487955 (+)
LOC110488013 LOC106570470 coding upstream 456619 16228573 ~ 16351043 (+)
dss1 NA coding upstream 594825 16203473 ~ 16252597 (+)
LOC110488022 tfpi2 coding downstream 22846 16827065 ~ 16834652 (+)
calcr LOC106588943 coding downstream 38872 16846734 ~ 16955570 (+)
LOC110488025 cdk6 coding downstream 486481 17294343 ~ 17364119 (+)
fam133b fam133b coding downstream 560906 17368768 ~ 17374337 (+)
LOC110488030 LOC106588950 coding downstream 572307 17380169 ~ 17388113 (+)
G2301610 NA non-coding upstream 709 16806652 ~ 16806953 (+)
G2301601 NA non-coding upstream 3785 16803620 ~ 16803877 (+)
G2301600 NA non-coding upstream 4089 16803281 ~ 16803573 (+)
G2301599 NA non-coding upstream 4704 16802611 ~ 16802958 (+)
G2301598 NA non-coding upstream 5256 16799363 ~ 16802406 (+)
G2301617 NA non-coding downstream 5769 16813631 ~ 16814051 (+)
G2301623 NA non-coding downstream 12362 16820224 ~ 16820461 (+)
G2301625 NA non-coding downstream 14788 16822650 ~ 16822904 (+)
G2301627 NA non-coding downstream 16165 16824027 ~ 16824262 (+)
G2301630 NA non-coding downstream 18582 16826444 ~ 16826787 (+)
G2301522 LOC106570460 other upstream 130991 16669607 ~ 16693934 (+)
G2301452 NA other upstream 282268 16524510 ~ 16525394 (+)
G2301841 NA other downstream 378703 17186565 ~ 17193117 (+)
G2303854 hsf1b other downstream 1969483 18777345 ~ 18783027 (+)
LOC110488049 recql4 other downstream 2193480 18998633 ~ 19016439 (+)
dgat1a LOC106570407 other downstream 2546349 19354178 ~ 19379095 (+)

Expression


Co-expression Network