G2301623


Basic Information

Item Value
gene id G2301623
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 16820224 ~ 16820461 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2632953
catcaatctacacacaataccccaggttggaaaaaaaggaaatatcacatttaaataagtatttagaccctttactcagtactttgttgaagcacatgtggcagtgattacagccttgagtcttcttgggtatgactctataagcttggcacacctgtatttggggattttctcccattcttctctgcagatcctctcaagctctgtcaggttggatggggagcgttgctgcacagct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2632953 True 238 lncRNA 0.43 1 16820224 16820461

Neighbor

gene id symbol gene type direction distance location
LOC110488019 LOC106570458 coding upstream 33385 16785333 ~ 16788539 (+)
LOC110488017 LOC106570464 coding upstream 183335 16603599 ~ 16639641 (+)
LOC110488016 LOC106570467 coding upstream 332269 16463563 ~ 16487955 (+)
LOC110488013 LOC106570470 coding upstream 469181 16228573 ~ 16351043 (+)
dss1 NA coding upstream 607387 16203473 ~ 16252597 (+)
LOC110488022 tfpi2 coding downstream 10247 16827065 ~ 16834652 (+)
calcr LOC106588943 coding downstream 26273 16846734 ~ 16955570 (+)
LOC110488025 cdk6 coding downstream 473882 17294343 ~ 17364119 (+)
fam133b fam133b coding downstream 548307 17368768 ~ 17374337 (+)
LOC110488030 LOC106588950 coding downstream 559708 17380169 ~ 17388113 (+)
G2301617 NA non-coding upstream 6173 16813631 ~ 16814051 (+)
G2301611 NA non-coding upstream 12362 16807662 ~ 16807862 (+)
G2301610 NA non-coding upstream 13271 16806652 ~ 16806953 (+)
G2301601 NA non-coding upstream 16347 16803620 ~ 16803877 (+)
G2301600 NA non-coding upstream 16651 16803281 ~ 16803573 (+)
G2301625 NA non-coding downstream 2189 16822650 ~ 16822904 (+)
G2301627 NA non-coding downstream 3566 16824027 ~ 16824262 (+)
G2301630 NA non-coding downstream 5983 16826444 ~ 16826787 (+)
G2301606 NA non-coding downstream 15017 16835478 ~ 16836144 (+)
G2301681 NA non-coding downstream 78588 16899049 ~ 16901831 (+)
G2301522 LOC106570460 other upstream 143553 16669607 ~ 16693934 (+)
G2301452 NA other upstream 294830 16524510 ~ 16525394 (+)
G2301841 NA other downstream 366104 17186565 ~ 17193117 (+)
G2303854 hsf1b other downstream 1956884 18777345 ~ 18783027 (+)
LOC110488049 recql4 other downstream 2180881 18998633 ~ 19016439 (+)
dgat1a LOC106570407 other downstream 2533750 19354178 ~ 19379095 (+)

Expression


Co-expression Network