G2301627


Basic Information

Item Value
gene id G2301627
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 16824027 ~ 16824262 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2632957
TCTCTCAGGTCTAAAGCTAAAAGTGTGGGCTCTATAACCAGAGAAGCAGAGGTGAAGCGAGAGGGtctgcccaaaatctgtccacaaAAATAGGACCACGCAGTGGAGGTCAATGTGTGTTTAATTTTGTttacaaaaaatgtaattgctaataTGCTATGTcaggcttatttgatcgaatagaacATGATGCTTATTTGATCTAATTTAAGTTTCCTAATGGTTGGGCTCTCTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2632957 True 236 lncRNA 0.39 1 16824027 16824262

Neighbor

gene id symbol gene type direction distance location
LOC110488019 LOC106570458 coding upstream 37188 16785333 ~ 16788539 (+)
LOC110488017 LOC106570464 coding upstream 187138 16603599 ~ 16639641 (+)
LOC110488016 LOC106570467 coding upstream 336072 16463563 ~ 16487955 (+)
LOC110488013 LOC106570470 coding upstream 472984 16228573 ~ 16351043 (+)
dss1 NA coding upstream 611190 16203473 ~ 16252597 (+)
LOC110488022 tfpi2 coding downstream 6446 16827065 ~ 16834652 (+)
calcr LOC106588943 coding downstream 22472 16846734 ~ 16955570 (+)
LOC110488025 cdk6 coding downstream 470081 17294343 ~ 17364119 (+)
fam133b fam133b coding downstream 544506 17368768 ~ 17374337 (+)
LOC110488030 LOC106588950 coding downstream 555907 17380169 ~ 17388113 (+)
G2301625 NA non-coding upstream 1123 16822650 ~ 16822904 (+)
G2301623 NA non-coding upstream 3566 16820224 ~ 16820461 (+)
G2301617 NA non-coding upstream 9976 16813631 ~ 16814051 (+)
G2301611 NA non-coding upstream 16165 16807662 ~ 16807862 (+)
G2301610 NA non-coding upstream 17074 16806652 ~ 16806953 (+)
G2301630 NA non-coding downstream 2182 16826444 ~ 16826787 (+)
G2301606 NA non-coding downstream 11216 16835478 ~ 16836144 (+)
G2301681 NA non-coding downstream 74787 16899049 ~ 16901831 (+)
G2301682 NA non-coding downstream 76820 16901082 ~ 16902163 (+)
G2301706 NA non-coding downstream 125795 16950057 ~ 16950275 (+)
G2301522 LOC106570460 other upstream 147356 16669607 ~ 16693934 (+)
G2301452 NA other upstream 298633 16524510 ~ 16525394 (+)
G2301841 NA other downstream 362303 17186565 ~ 17193117 (+)
G2303854 hsf1b other downstream 1953083 18777345 ~ 18783027 (+)
LOC110488049 recql4 other downstream 2177080 18998633 ~ 19016439 (+)
dgat1a LOC106570407 other downstream 2529949 19354178 ~ 19379095 (+)

Expression


Co-expression Network