Gene
RNA
| Item | Value |
|---|---|
| gene id | G2301606 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 16835478 ~ 16836144 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2632936 | True | 667 | lncRNA | 0.41 | 1 | 16835478 | 16836144 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110488022 | tfpi2 | coding | upstream | 826 | 16827065 ~ 16834652 (+) |
| LOC110488019 | LOC106570458 | coding | upstream | 48639 | 16785333 ~ 16788539 (+) |
| LOC110488017 | LOC106570464 | coding | upstream | 198589 | 16603599 ~ 16639641 (+) |
| LOC110488016 | LOC106570467 | coding | upstream | 347523 | 16463563 ~ 16487955 (+) |
| LOC110488013 | LOC106570470 | coding | upstream | 484435 | 16228573 ~ 16351043 (+) |
| calcr | LOC106588943 | coding | downstream | 10590 | 16846734 ~ 16955570 (+) |
| LOC110488025 | cdk6 | coding | downstream | 458199 | 17294343 ~ 17364119 (+) |
| fam133b | fam133b | coding | downstream | 532624 | 17368768 ~ 17374337 (+) |
| LOC110488030 | LOC106588950 | coding | downstream | 544025 | 17380169 ~ 17388113 (+) |
| pex1 | pex1 | coding | downstream | 557210 | 17393354 ~ 17421512 (+) |
| G2301630 | NA | non-coding | upstream | 8691 | 16826444 ~ 16826787 (+) |
| G2301627 | NA | non-coding | upstream | 11216 | 16824027 ~ 16824262 (+) |
| G2301625 | NA | non-coding | upstream | 12574 | 16822650 ~ 16822904 (+) |
| G2301623 | NA | non-coding | upstream | 15017 | 16820224 ~ 16820461 (+) |
| G2301617 | NA | non-coding | upstream | 21427 | 16813631 ~ 16814051 (+) |
| G2301681 | NA | non-coding | downstream | 62905 | 16899049 ~ 16901831 (+) |
| G2301682 | NA | non-coding | downstream | 64938 | 16901082 ~ 16902163 (+) |
| G2301706 | NA | non-coding | downstream | 113913 | 16950057 ~ 16950275 (+) |
| G2301716 | NA | non-coding | downstream | 138289 | 16974433 ~ 16979513 (+) |
| G2301522 | LOC106570460 | other | upstream | 158807 | 16669607 ~ 16693934 (+) |
| G2301452 | NA | other | upstream | 310084 | 16524510 ~ 16525394 (+) |
| G2301841 | NA | other | downstream | 350421 | 17186565 ~ 17193117 (+) |
| G2303854 | hsf1b | other | downstream | 1941201 | 18777345 ~ 18783027 (+) |
| LOC110488049 | recql4 | other | downstream | 2165198 | 18998633 ~ 19016439 (+) |
| dgat1a | LOC106570407 | other | downstream | 2518067 | 19354178 ~ 19379095 (+) |
| G2304678 | NA | other | downstream | 2992073 | 19828217 ~ 19829961 (+) |
