G2301682


Basic Information

Item Value
gene id G2301682
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 16901082 ~ 16902163 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2633017
GAGGTAAAGTAGGTAAACATGTAGAGGTAAAGTaggtaaagcatgtagaggtaaagtagctaaagcatgtagaggtaaagtATGTAAAATATGTAGAGGTAAAGTaggtaaagcatgtagaggtaaagtagctaaagcatgtagaggtaaagtaggtaaagcatgtagaggtaaagtAGCTAAAGCATGTAGTGGTAAAGTaggtaaagcatgtagaggtaaagtaggtaaagcatgtagaggtaaagtaggtaaagcatgtagaggtaaagtagataaagcatgtagaggtaaagtaggtaaagcatgtagaggtaaagtaggtaaagcatgtagaggtaaagtaggtaaagcatgtagaggtaaagtagataaagcatgtagaggtaaagtaggtaaagcatgtagtggtaaagtaggtaaagcatgttgaggtaaagtaggtaaagcatgtagaggtaaagtAGGTAAAGCATGTAAGCATGTATATGTAAAGTaggtaaagcatgtagaggtaaagtaggtaaagcatgtagaggtaaaaTTAGGTAAAGCATGTAAAGTaggtaaagcatgtagaggtaaagtaggtaaaacatgtagaggtaaagtaggtaaagcatgtagaggtaaagtagctaaagcatgtagaggtaaagtaggtaaagcatgtagaggtaaagtagctaaagcat
>TU2633018
GAGGTAAAGTAGGTAAACATGTAGAGGTAAAGTaggtaaagcatgtagaggtaaagtagctaaagcatgtagaggtaaagtATGTAAAATATGTAGAGGTAAAGTaggtaaagcatgtagaggtaaagtagctaaagcatgtagaggtaaagtaggtaaagcatgtagaggtaaagtAGCTAAAGCATGTAGTGGTAAAGTaggtaaagcatgtagaggtaaagtaggtaaagcatgtagaggtaaagtaggtaaagcatgtagaggtaaagtagataaagcatgtagaggtaaagtaggtaaagcatgtagagTTAAAGTaggtaaagcatgtagaggtaaagtAGGTAAAGCATGTAGAGCTTGCCCAGGTAAAACATGTAGAGGTAAAGTAGATAAAGCATGTAGAGCTTGCCCAGGTAAAGCATGTAGAAATGAGTTTTCTTTGTCACCAAAATGGATTCTAGACATTTTATTTAACATGTTTGTCGGGAC

Function

NR:

description
PREDICTED: uncharacterized protein LOC107565839

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2633017 False 695 lncRNA 0.36 2 16901082 16901928
TU2633018 True 495 lncRNA 0.37 2 16901082 16902163

Neighbor

gene id symbol gene type direction distance location
LOC110488022 tfpi2 coding upstream 66430 16827065 ~ 16834652 (+)
LOC110488019 LOC106570458 coding upstream 114243 16785333 ~ 16788539 (+)
LOC110488017 LOC106570464 coding upstream 264193 16603599 ~ 16639641 (+)
LOC110488016 LOC106570467 coding upstream 413127 16463563 ~ 16487955 (+)
LOC110488013 LOC106570470 coding upstream 550039 16228573 ~ 16351043 (+)
LOC110488025 cdk6 coding downstream 392180 17294343 ~ 17364119 (+)
fam133b fam133b coding downstream 466605 17368768 ~ 17374337 (+)
LOC110488030 LOC106588950 coding downstream 478006 17380169 ~ 17388113 (+)
pex1 pex1 coding downstream 491191 17393354 ~ 17421512 (+)
clcc1 LOC106570443 coding downstream 802326 17704489 ~ 17713221 (+)
G2301606 NA non-coding upstream 64938 16835478 ~ 16836144 (+)
G2301630 NA non-coding upstream 74295 16826444 ~ 16826787 (+)
G2301627 NA non-coding upstream 76820 16824027 ~ 16824262 (+)
G2301625 NA non-coding upstream 78178 16822650 ~ 16822904 (+)
G2301623 NA non-coding upstream 80621 16820224 ~ 16820461 (+)
G2301706 NA non-coding downstream 47894 16950057 ~ 16950275 (+)
calcr LOC106588943 non-coding downstream 50778 16846734 ~ 16955570 (+)
G2301716 NA non-coding downstream 72270 16974433 ~ 16979513 (+)
G2301726 vps50 non-coding downstream 96138 16998301 ~ 17014938 (+)
G2301758 NA non-coding downstream 141750 17043913 ~ 17044839 (+)
G2301522 LOC106570460 other upstream 224411 16669607 ~ 16693934 (+)
G2301452 NA other upstream 375688 16524510 ~ 16525394 (+)
G2301841 NA other downstream 284402 17186565 ~ 17193117 (+)
G2303854 hsf1b other downstream 1875182 18777345 ~ 18783027 (+)
LOC110488049 recql4 other downstream 2099179 18998633 ~ 19016439 (+)
dgat1a LOC106570407 other downstream 2452048 19354178 ~ 19379095 (+)
G2304678 NA other downstream 2926054 19828217 ~ 19829961 (+)

Expression


Co-expression Network