G2301716


Basic Information

Item Value
gene id G2301716
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 16974433 ~ 16979513 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2633064
acacacagcggtatggacacacacagcagtatggacacacagcgGTATAGACACTCACAACAGTATGGACACACAGTGGTATGGACATACAGCGGTATAGACactcacagcagtatggacacacacagcagtatgaACACACAgcggtatggacacacacagcagtatggacacacagcagtatggacacacagcagtatggacacacagtggtatagacactcacagcagtatggacacacagcagtatggacacacacagtGGTATAGACATACACATCGGTATGgacacacagcagtatggacacacagcggtatggacacacacagtGGTATAGACATACACATCGGTATGgacacacagcagtatggacacacagcggtatggacacacacagtagtatagac

Function

NR:

description
PREDICTED: extensin-3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2633064 True 408 lncRNA 0.49 4 16974433 16979513

Neighbor

gene id symbol gene type direction distance location
calcr LOC106588943 coding upstream 18863 16846734 ~ 16955570 (+)
LOC110488022 tfpi2 coding upstream 139781 16827065 ~ 16834652 (+)
LOC110488019 LOC106570458 coding upstream 187594 16785333 ~ 16788539 (+)
LOC110488017 LOC106570464 coding upstream 337544 16603599 ~ 16639641 (+)
LOC110488016 LOC106570467 coding upstream 486478 16463563 ~ 16487955 (+)
LOC110488025 cdk6 coding downstream 314830 17294343 ~ 17364119 (+)
fam133b fam133b coding downstream 389255 17368768 ~ 17374337 (+)
LOC110488030 LOC106588950 coding downstream 400656 17380169 ~ 17388113 (+)
pex1 pex1 coding downstream 413841 17393354 ~ 17421512 (+)
clcc1 LOC106570443 coding downstream 724976 17704489 ~ 17713221 (+)
G2301706 NA non-coding upstream 24158 16950057 ~ 16950275 (+)
G2301682 NA non-coding upstream 72270 16901082 ~ 16902163 (+)
G2301681 NA non-coding upstream 72602 16899049 ~ 16901831 (+)
G2301606 NA non-coding upstream 138289 16835478 ~ 16836144 (+)
G2301726 vps50 non-coding downstream 18788 16998301 ~ 17014938 (+)
G2301758 NA non-coding downstream 64400 17043913 ~ 17044839 (+)
G2301764 NA non-coding downstream 70496 17050009 ~ 17051608 (+)
G2301773 NA non-coding downstream 81577 17061090 ~ 17063174 (+)
G2301774 NA non-coding downstream 82262 17061775 ~ 17062837 (+)
G2301522 LOC106570460 other upstream 297762 16669607 ~ 16693934 (+)
G2301452 NA other upstream 449039 16524510 ~ 16525394 (+)
G2301841 NA other downstream 207052 17186565 ~ 17193117 (+)
G2303854 hsf1b other downstream 1797832 18777345 ~ 18783027 (+)
LOC110488049 recql4 other downstream 2021829 18998633 ~ 19016439 (+)
dgat1a LOC106570407 other downstream 2374698 19354178 ~ 19379095 (+)
G2304678 NA other downstream 2848704 19828217 ~ 19829961 (+)

Expression


Co-expression Network