Gene
RNA
| Item | Value |
|---|---|
| gene id | G2301758 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 17043913 ~ 17044839 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2633108 | True | 243 | lncRNA | 0.56 | 2 | 17043913 | 17044839 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| calcr | LOC106588943 | coding | upstream | 88343 | 16846734 ~ 16955570 (+) |
| LOC110488022 | tfpi2 | coding | upstream | 209261 | 16827065 ~ 16834652 (+) |
| LOC110488019 | LOC106570458 | coding | upstream | 257074 | 16785333 ~ 16788539 (+) |
| LOC110488017 | LOC106570464 | coding | upstream | 407024 | 16603599 ~ 16639641 (+) |
| LOC110488016 | LOC106570467 | coding | upstream | 555958 | 16463563 ~ 16487955 (+) |
| LOC110488025 | cdk6 | coding | downstream | 249504 | 17294343 ~ 17364119 (+) |
| fam133b | fam133b | coding | downstream | 323929 | 17368768 ~ 17374337 (+) |
| LOC110488030 | LOC106588950 | coding | downstream | 335330 | 17380169 ~ 17388113 (+) |
| pex1 | pex1 | coding | downstream | 348515 | 17393354 ~ 17421512 (+) |
| clcc1 | LOC106570443 | coding | downstream | 659650 | 17704489 ~ 17713221 (+) |
| G2301726 | vps50 | non-coding | upstream | 28975 | 16998301 ~ 17014938 (+) |
| G2301716 | NA | non-coding | upstream | 64400 | 16974433 ~ 16979513 (+) |
| G2301706 | NA | non-coding | upstream | 93638 | 16950057 ~ 16950275 (+) |
| G2301682 | NA | non-coding | upstream | 141750 | 16901082 ~ 16902163 (+) |
| G2301764 | NA | non-coding | downstream | 5170 | 17050009 ~ 17051608 (+) |
| G2301773 | NA | non-coding | downstream | 16251 | 17061090 ~ 17063174 (+) |
| G2301774 | NA | non-coding | downstream | 16936 | 17061775 ~ 17062837 (+) |
| G2301775 | NA | non-coding | downstream | 18046 | 17062885 ~ 17064464 (+) |
| G2302251 | NA | non-coding | downstream | 199213 | 17244052 ~ 17244850 (+) |
| G2301522 | LOC106570460 | other | upstream | 367242 | 16669607 ~ 16693934 (+) |
| G2301452 | NA | other | upstream | 518519 | 16524510 ~ 16525394 (+) |
| G2301841 | NA | other | downstream | 141726 | 17186565 ~ 17193117 (+) |
| G2303854 | hsf1b | other | downstream | 1732506 | 18777345 ~ 18783027 (+) |
| LOC110488049 | recql4 | other | downstream | 1956503 | 18998633 ~ 19016439 (+) |
| dgat1a | LOC106570407 | other | downstream | 2309372 | 19354178 ~ 19379095 (+) |
| G2304678 | NA | other | downstream | 2783378 | 19828217 ~ 19829961 (+) |
