G2301773


Basic Information

Item Value
gene id G2301773
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 17061090 ~ 17063174 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2633124
actatttcactacaggtagactatttcactacttgtagactatttcactacaggtagactatttcactactGAATTTACTACTGGTAGACTATTTCACGACAGGTAGACTATTTAACTACTGATTTCAATACAGGTAGACTTTCACTACTGGCAGACTATTTCACTACgggtagactatttcactacgggtagactatttcactactGGCAGACTATTTCACTACTGgtagactatttcactactAATTTCAATACAGGTAGACTGTTTCACTACTGGCAGACTATTTCATTACtggtagacta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2633124 True 304 lncRNA 0.37 2 17061090 17063174

Neighbor

gene id symbol gene type direction distance location
calcr LOC106588943 coding upstream 105520 16846734 ~ 16955570 (+)
LOC110488022 tfpi2 coding upstream 226438 16827065 ~ 16834652 (+)
LOC110488019 LOC106570458 coding upstream 274251 16785333 ~ 16788539 (+)
LOC110488017 LOC106570464 coding upstream 424201 16603599 ~ 16639641 (+)
LOC110488016 LOC106570467 coding upstream 573135 16463563 ~ 16487955 (+)
LOC110488025 cdk6 coding downstream 231169 17294343 ~ 17364119 (+)
fam133b fam133b coding downstream 305594 17368768 ~ 17374337 (+)
LOC110488030 LOC106588950 coding downstream 316995 17380169 ~ 17388113 (+)
pex1 pex1 coding downstream 330180 17393354 ~ 17421512 (+)
clcc1 LOC106570443 coding downstream 641315 17704489 ~ 17713221 (+)
G2301764 NA non-coding upstream 9482 17050009 ~ 17051608 (+)
G2301758 NA non-coding upstream 16251 17043913 ~ 17044839 (+)
G2301726 vps50 non-coding upstream 46152 16998301 ~ 17014938 (+)
G2301716 NA non-coding upstream 81577 16974433 ~ 16979513 (+)
G2302251 NA non-coding downstream 180878 17244052 ~ 17244850 (+)
G2302279 NA non-coding downstream 207124 17270298 ~ 17271024 (+)
G2302324 NA non-coding downstream 260317 17323491 ~ 17323876 (+)
G2302325 NA non-coding downstream 261040 17324214 ~ 17324644 (+)
G2302327 LOC100194703 non-coding downstream 263873 17327047 ~ 17327345 (+)
G2301522 LOC106570460 other upstream 384419 16669607 ~ 16693934 (+)
G2301452 NA other upstream 535696 16524510 ~ 16525394 (+)
G2301841 NA other downstream 123391 17186565 ~ 17193117 (+)
G2303854 hsf1b other downstream 1714171 18777345 ~ 18783027 (+)
LOC110488049 recql4 other downstream 1938168 18998633 ~ 19016439 (+)
dgat1a LOC106570407 other downstream 2291037 19354178 ~ 19379095 (+)
G2304678 NA other downstream 2765043 19828217 ~ 19829961 (+)

Expression


Co-expression Network