G2302279


Basic Information

Item Value
gene id G2302279
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 17270298 ~ 17271024 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2633689
tggtgtgttcagggtgatgagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagttcaattttggtttcatctgaccagagcaccttcttccaaatgtttggtgtgtctcccaggtggcttgtggcaaactttaaccaacactttttatggatatctttaagaaatagctttcttcttgccactcttccataaaggccagatttgtgcaatatacgactgatcgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctccttgtatgagctgaaagtttagagggatggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatcttgttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtatgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaatgtaaaggggctga

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2633689 True 727 lncRNA 0.43 1 17270298 17271024

Neighbor

gene id symbol gene type direction distance location
calcr LOC106588943 coding upstream 314728 16846734 ~ 16955570 (+)
LOC110488022 tfpi2 coding upstream 435646 16827065 ~ 16834652 (+)
LOC110488019 LOC106570458 coding upstream 483459 16785333 ~ 16788539 (+)
LOC110488017 LOC106570464 coding upstream 633409 16603599 ~ 16639641 (+)
LOC110488016 LOC106570467 coding upstream 782343 16463563 ~ 16487955 (+)
LOC110488025 cdk6 coding downstream 23319 17294343 ~ 17364119 (+)
fam133b fam133b coding downstream 97744 17368768 ~ 17374337 (+)
LOC110488030 LOC106588950 coding downstream 109145 17380169 ~ 17388113 (+)
pex1 pex1 coding downstream 122330 17393354 ~ 17421512 (+)
clcc1 LOC106570443 coding downstream 433465 17704489 ~ 17713221 (+)
G2302251 NA non-coding upstream 25448 17244052 ~ 17244850 (+)
G2301775 NA non-coding upstream 205834 17062885 ~ 17064464 (+)
G2301773 NA non-coding upstream 207124 17061090 ~ 17063174 (+)
G2301774 NA non-coding upstream 207461 17061775 ~ 17062837 (+)
G2301764 NA non-coding upstream 218690 17050009 ~ 17051608 (+)
G2302324 NA non-coding downstream 52467 17323491 ~ 17323876 (+)
G2302325 NA non-coding downstream 53190 17324214 ~ 17324644 (+)
G2302327 LOC100194703 non-coding downstream 56023 17327047 ~ 17327345 (+)
G2302329 NA non-coding downstream 57682 17328706 ~ 17329147 (+)
G2302330 NA non-coding downstream 58564 17329588 ~ 17329800 (+)
G2301841 NA other upstream 77181 17186565 ~ 17193117 (+)
G2301522 LOC106570460 other upstream 593627 16669607 ~ 16693934 (+)
G2303854 hsf1b other downstream 1506321 18777345 ~ 18783027 (+)
LOC110488049 recql4 other downstream 1730318 18998633 ~ 19016439 (+)
dgat1a LOC106570407 other downstream 2083187 19354178 ~ 19379095 (+)
G2304678 NA other downstream 2557193 19828217 ~ 19829961 (+)
G2305956 NA other downstream 3282309 20553333 ~ 20553684 (+)

Expression


Co-expression Network