G2302327 (LOC100194703)


Basic Information

Item Value
gene id G2302327
gene name LOC100194703
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 17327047 ~ 17327345 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2633743
gcaaaattgtgagtgagcccactccctttgCCGAGAAGCAAGCCCACACATGagtggtctcaggatgctttactgttggcatgacacaggactgatggtagcgctcaccttgtcttctccggacaagcttttttccggatgccccaaacaatcggaaaggggattcatcagagaaaaatactttaccccagtcctcagcagtccaatcgatgtaccttttgcagaatatcagtctgtccctgatgtttttcctagagagaagtggcttctttgctgcccttcttgacaccaggccatcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2633743 True 299 lncRNA 0.49 1 17327047 17327345

Neighbor

gene id symbol gene type direction distance location
calcr LOC106588943 coding upstream 371477 16846734 ~ 16955570 (+)
LOC110488022 tfpi2 coding upstream 492395 16827065 ~ 16834652 (+)
LOC110488019 LOC106570458 coding upstream 540208 16785333 ~ 16788539 (+)
LOC110488017 LOC106570464 coding upstream 690158 16603599 ~ 16639641 (+)
LOC110488016 LOC106570467 coding upstream 839092 16463563 ~ 16487955 (+)
fam133b fam133b coding downstream 41423 17368768 ~ 17374337 (+)
LOC110488030 LOC106588950 coding downstream 52824 17380169 ~ 17388113 (+)
pex1 pex1 coding downstream 66009 17393354 ~ 17421512 (+)
clcc1 LOC106570443 coding downstream 377144 17704489 ~ 17713221 (+)
LOC110488036 LOC106570445 coding downstream 435661 17763006 ~ 17784596 (+)
G2302325 NA non-coding upstream 2403 17324214 ~ 17324644 (+)
G2302324 NA non-coding upstream 3171 17323491 ~ 17323876 (+)
G2302279 NA non-coding upstream 56023 17270298 ~ 17271024 (+)
G2302251 NA non-coding upstream 82197 17244052 ~ 17244850 (+)
G2301775 NA non-coding upstream 262583 17062885 ~ 17064464 (+)
G2302329 NA non-coding downstream 1361 17328706 ~ 17329147 (+)
G2302330 NA non-coding downstream 2243 17329588 ~ 17329800 (+)
LOC110488025 cdk6 non-coding downstream 32660 17294343 ~ 17364119 (+)
G2302297 NA non-coding downstream 37708 17365053 ~ 17366776 (+)
G2302298 NA non-coding downstream 122318 17449663 ~ 17454026 (+)
G2301841 NA other upstream 133930 17186565 ~ 17193117 (+)
G2301522 LOC106570460 other upstream 650376 16669607 ~ 16693934 (+)
G2303854 hsf1b other downstream 1450000 18777345 ~ 18783027 (+)
LOC110488049 recql4 other downstream 1673997 18998633 ~ 19016439 (+)
dgat1a LOC106570407 other downstream 2026866 19354178 ~ 19379095 (+)
G2304678 NA other downstream 2500872 19828217 ~ 19829961 (+)
G2305956 NA other downstream 3225988 20553333 ~ 20553684 (+)

Expression


Co-expression Network