G2302330


Basic Information

Item Value
gene id G2302330
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 17329588 ~ 17329800 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2633746
ggcagttaacccactgttcctaggccgtcattgaaaataataatttgttcttaactgacttgcctagttaaataaaggtaaaatatatatattttttgaatgtTGAATTGGACATTCCTTTTTCCACAATCAGAAGTCTTCATGTCTTGAATGAGTTACTGTTCAGCTGCTCCGTTATGTCACAGAGTATATCCTGATTTATAAAGAGAGGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2633746 True 213 lncRNA 0.35 1 17329588 17329800

Neighbor

gene id symbol gene type direction distance location
calcr LOC106588943 coding upstream 374018 16846734 ~ 16955570 (+)
LOC110488022 tfpi2 coding upstream 494936 16827065 ~ 16834652 (+)
LOC110488019 LOC106570458 coding upstream 542749 16785333 ~ 16788539 (+)
LOC110488017 LOC106570464 coding upstream 692699 16603599 ~ 16639641 (+)
LOC110488016 LOC106570467 coding upstream 841633 16463563 ~ 16487955 (+)
fam133b fam133b coding downstream 38968 17368768 ~ 17374337 (+)
LOC110488030 LOC106588950 coding downstream 50369 17380169 ~ 17388113 (+)
pex1 pex1 coding downstream 63554 17393354 ~ 17421512 (+)
clcc1 LOC106570443 coding downstream 374689 17704489 ~ 17713221 (+)
LOC110488036 LOC106570445 coding downstream 433206 17763006 ~ 17784596 (+)
G2302329 NA non-coding upstream 441 17328706 ~ 17329147 (+)
G2302327 LOC100194703 non-coding upstream 2243 17327047 ~ 17327345 (+)
G2302325 NA non-coding upstream 4944 17324214 ~ 17324644 (+)
G2302324 NA non-coding upstream 5712 17323491 ~ 17323876 (+)
G2302279 NA non-coding upstream 58564 17270298 ~ 17271024 (+)
LOC110488025 cdk6 non-coding downstream 30205 17294343 ~ 17364119 (+)
G2302297 NA non-coding downstream 35253 17365053 ~ 17366776 (+)
G2302298 NA non-coding downstream 119863 17449663 ~ 17454026 (+)
G2302417 NA non-coding downstream 205844 17535644 ~ 17537114 (+)
G2302427 NA non-coding downstream 241151 17570951 ~ 17572613 (+)
G2301841 NA other upstream 136471 17186565 ~ 17193117 (+)
G2301522 LOC106570460 other upstream 652917 16669607 ~ 16693934 (+)
G2303854 hsf1b other downstream 1447545 18777345 ~ 18783027 (+)
LOC110488049 recql4 other downstream 1671542 18998633 ~ 19016439 (+)
dgat1a LOC106570407 other downstream 2024411 19354178 ~ 19379095 (+)
G2304678 NA other downstream 2498417 19828217 ~ 19829961 (+)
G2305956 NA other downstream 3223533 20553333 ~ 20553684 (+)

Expression


Co-expression Network