G2302297


Basic Information

Item Value
gene id G2302297
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 17365053 ~ 17366776 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2633711
GATCATGACATAGCAGAATTGACAGAAGATCATGACATAGCAGAATAGACAGAAAATCATGACATAGCAGAATTGACCGAAGATCATGACATAGCAGAATTGACAGAAGATCATGACATAGAAGAATTGACATAAGATCATGACATAGCAGAATAGACAGAAGATCATGACATAGCAGAATAGACAGAAGATCATGACATAGCAGAATTGACAGGAGATCATGACATAGCAGAATAGACAGCAGAACATGCCATAGCAGAATAGACAGAAGAGCATGCCATAGCAGAATAGACAGAAGAGCATGACATAGCAGAATTGACAGAAGATCATGACATAGCTGAATTGACAGAAGATCATGACATAGCAGAATTGACAGAAGATCATGACATAGCAGAATTGACAGAAGATCATGACATAGCAGAATTGACAGAAGATCATGACATAGCAGAATTGACAGAAGATCATGACATAGCAGAATTGACAGAAGATCATGACATAGCAGAATTGACAGAAGATCATGACATAGCAGAATTGACAGAAGATCATGACATAGCAGAATTGACAGAAGATCATGACATAGCAGAATTGACAGAAGATCATGACATAGCAGAATTGACAGAAGATCATGAGtcccttttttttgttgcaacaACACATTTAACATTCCACGCAAATCTCTTCTATACTGCATATCAAAACAACAATGGATTACATAGTATTACATAACAAATATGTATCCTTCCTATACATTTTAAATGACTTCTCTCACTACTGCTTATCTAAACAATGCAGAATTAGCACCATACAGTCATACAAGTCTTATTTTGAAATAGACCCAATATATCATGTTTGAGATTTGTTATTATAACTTATGTCCTTAAAACAGAGGCGGAGTCCctaatggagccctattccctagggcCCTGGCCAAAGGTAGTGCACAAtctagggaataggttgccatttgggcaCATCCAGCGAGGCCAAACACAGATAACAAGCGAATACCCCCCCCACCCAATGCAATACAGATCACCATGCCTACATTAAGCATAGAAGCCCAACCAGTATATATTGTGGTGTCTTCTGTACTTTAGCTACAGGTGTACAATAGTAGTGATCCCAGTAAAAGGACTTGCTCAATGACTCTCCAATGAAGCCCCAAATGATTTAGGCTTTAGTGGTTTTTTCTTGTACATAAGGTCTTATTTGTGCAGTTTATTTGTTTAGTATTTTTCTAGTATTTGTAGTGTTCTTCTTTTGAAAATATGTTTCATGTACAGTACAATGATGATGTGTTTTTCATGTGAAGAAGTTACTGATTTTGGGGAAGTTATGCTATTTAACTAACTAAAGGTCTTGCTATATAACATCATGTCTAGTCTAGGTCCATTATGTAGCCTGGTCTTATGTTTGTTCAGCAAAGCTGTTTTGAAGCAGGTTGTTGATGCCAGAATCCACATTTTTACAATGCCCGTTTTTTGCTAATATTGTAGTTCTGCCAAGAAACCGGATTTTAGGAAATACAGAGTATCAAATAGGAACATAGTTTGCTACTTATTTTTATTTCAATTGTATTTATCCATTTAGGCTTTCTCTAAACTGGTTTTGCTGCTATACAGTAATGCTCTCAAAACGTATTTTAAAAACATATTATGACCCACCATAAGGTTATCTAAGTGTATGTAGCAGCTTAACATTTCTGATATTGTATTCACAACTGC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106572272

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2633711 True 1724 lncRNA 0.36 1 17365053 17366776

Neighbor

gene id symbol gene type direction distance location
LOC110488025 cdk6 coding upstream 4894 17294343 ~ 17364119 (+)
calcr LOC106588943 coding upstream 409483 16846734 ~ 16955570 (+)
LOC110488022 tfpi2 coding upstream 530401 16827065 ~ 16834652 (+)
LOC110488019 LOC106570458 coding upstream 578214 16785333 ~ 16788539 (+)
LOC110488017 LOC106570464 coding upstream 728164 16603599 ~ 16639641 (+)
fam133b fam133b coding downstream 1992 17368768 ~ 17374337 (+)
LOC110488030 LOC106588950 coding downstream 13393 17380169 ~ 17388113 (+)
pex1 pex1 coding downstream 26578 17393354 ~ 17421512 (+)
clcc1 LOC106570443 coding downstream 337713 17704489 ~ 17713221 (+)
LOC110488036 LOC106570445 coding downstream 396230 17763006 ~ 17784596 (+)
G2302330 NA non-coding upstream 35253 17329588 ~ 17329800 (+)
G2302329 NA non-coding upstream 35906 17328706 ~ 17329147 (+)
G2302327 LOC100194703 non-coding upstream 37708 17327047 ~ 17327345 (+)
G2302325 NA non-coding upstream 40409 17324214 ~ 17324644 (+)
G2302298 NA non-coding downstream 82887 17449663 ~ 17454026 (+)
G2302417 NA non-coding downstream 168868 17535644 ~ 17537114 (+)
G2302427 NA non-coding downstream 204175 17570951 ~ 17572613 (+)
G2302430 NA non-coding downstream 209430 17576206 ~ 17576594 (+)
G2302462 rp9 non-coding downstream 303475 17670251 ~ 17671322 (+)
G2301841 NA other upstream 171936 17186565 ~ 17193117 (+)
G2301522 LOC106570460 other upstream 688382 16669607 ~ 16693934 (+)
G2303854 hsf1b other downstream 1410569 18777345 ~ 18783027 (+)
LOC110488049 recql4 other downstream 1634566 18998633 ~ 19016439 (+)
dgat1a LOC106570407 other downstream 1987435 19354178 ~ 19379095 (+)
G2304678 NA other downstream 2461441 19828217 ~ 19829961 (+)
G2305956 NA other downstream 3186557 20553333 ~ 20553684 (+)

Expression


Co-expression Network