G2302417


Basic Information

Item Value
gene id G2302417
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 17535644 ~ 17537114 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2633843
ggatagaggggatagtGGAAGGATATTGGAGATATAGCGGGGATAGTGGGATAGAGTGGATAGTGGAGAaatagagtggagagtggagggatagtggagatatagaggggatagtggaggtataggggggatagtggagggatagtggGATAGTGGAGATGTAGagtggatagtggagggatagagtggatagtggagggatagagtggttagtggagggatagaggggatagtggagggatagtggAGATATAGAGTGGATAGTAGAGGgatagagtggagagtggagggatAGTGGAGATATAGAAGGAAGTGAGATATAGAGGGGATAGTGGCGGGATAGAGGGGATAGTAGAAGGATAGAGGGGATAGTGAAGGGATAGAGGGGATAGTGGAGAaatagagtggagagtggagggatAGTGGAGATATAGAGGGGATAGTCGGATAGagtggatagtggagggatAGTGGAGATATAGAGGGGATAGTGGAGTGGATAGGGGAGCAATAGTGGAGGTATAGgggggatagtggagggatag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2633843 True 545 lncRNA 0.49 2 17535644 17537114

Neighbor

gene id symbol gene type direction distance location
pex1 pex1 coding upstream 114132 17393354 ~ 17421512 (+)
LOC110488030 LOC106588950 coding upstream 147531 17380169 ~ 17388113 (+)
fam133b fam133b coding upstream 161307 17368768 ~ 17374337 (+)
LOC110488025 cdk6 coding upstream 175485 17294343 ~ 17364119 (+)
calcr LOC106588943 coding upstream 580074 16846734 ~ 16955570 (+)
clcc1 LOC106570443 coding downstream 167375 17704489 ~ 17713221 (+)
LOC110488036 LOC106570445 coding downstream 225892 17763006 ~ 17784596 (+)
LOC110488037 LOC106570446 coding downstream 250663 17787777 ~ 17812354 (+)
LOC110489398 LOC106570447 coding downstream 325315 17862429 ~ 18232900 (+)
ctnnal1 LOC106588976 coding downstream 787403 18324517 ~ 18449153 (+)
G2302298 NA non-coding upstream 81618 17449663 ~ 17454026 (+)
G2302297 NA non-coding upstream 168868 17365053 ~ 17366776 (+)
G2302330 NA non-coding upstream 205844 17329588 ~ 17329800 (+)
G2302329 NA non-coding upstream 206497 17328706 ~ 17329147 (+)
G2302427 NA non-coding downstream 33837 17570951 ~ 17572613 (+)
G2302430 NA non-coding downstream 39092 17576206 ~ 17576594 (+)
G2302462 rp9 non-coding downstream 133137 17670251 ~ 17671322 (+)
G2302505 NA non-coding downstream 144330 17681444 ~ 17681820 (+)
G2302506 NA non-coding downstream 145250 17682364 ~ 17683057 (+)
G2301841 NA other upstream 342527 17186565 ~ 17193117 (+)
LOC110488022 tfpi2 other upstream 701259 16827065 ~ 16834652 (+)
LOC110488019 LOC106570458 other upstream 747105 16785333 ~ 16788539 (+)
G2301522 LOC106570460 other upstream 858973 16669607 ~ 16693934 (+)
LOC110488017 LOC106570464 other upstream 896003 16603599 ~ 16639641 (+)
G2303854 hsf1b other downstream 1240231 18777345 ~ 18783027 (+)
LOC110488049 recql4 other downstream 1464228 18998633 ~ 19016439 (+)
dgat1a LOC106570407 other downstream 1817097 19354178 ~ 19379095 (+)
G2304678 NA other downstream 2291103 19828217 ~ 19829961 (+)
G2305956 NA other downstream 3016219 20553333 ~ 20553684 (+)

Expression


Co-expression Network