G2302505


Basic Information

Item Value
gene id G2302505
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 17681444 ~ 17681820 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2633938
CCGTGACTTGCTCCGTTGAgaacaggactgctttgctagcgctGATTAGAGACTCCGCCGATAACGTCAACGAGCTAACCACCTCTGTCACTGGCTTCATTCGGAAATGCATCAgtgacattgtccccacagtgaaggttCACTGCTTCCTCTAAAGCCTGGGATTAatcaccaaagcccaatatactacccaccattgcgacctgtatgctctcgttggctggtcctcacttcatattcgtcgccaaacccactggttccaggtcatctataagtctttgctaggtaaagccctgccttatctcagctcactggtcaccatagcagcacccacccgtagcacgtgctccagcaggtatatttcactggtcaccccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2633938 True 377 lncRNA 0.51 1 17681444 17681820

Neighbor

gene id symbol gene type direction distance location
pex1 pex1 coding upstream 259932 17393354 ~ 17421512 (+)
LOC110488030 LOC106588950 coding upstream 293331 17380169 ~ 17388113 (+)
fam133b fam133b coding upstream 307107 17368768 ~ 17374337 (+)
LOC110488025 cdk6 coding upstream 321285 17294343 ~ 17364119 (+)
calcr LOC106588943 coding upstream 725874 16846734 ~ 16955570 (+)
clcc1 LOC106570443 coding downstream 22669 17704489 ~ 17713221 (+)
LOC110488036 LOC106570445 coding downstream 81186 17763006 ~ 17784596 (+)
LOC110488037 LOC106570446 coding downstream 105957 17787777 ~ 17812354 (+)
LOC110489398 LOC106570447 coding downstream 180609 17862429 ~ 18232900 (+)
ctnnal1 LOC106588976 coding downstream 642697 18324517 ~ 18449153 (+)
G2302462 rp9 non-coding upstream 10122 17670251 ~ 17671322 (+)
G2302430 NA non-coding upstream 104850 17576206 ~ 17576594 (+)
G2302427 NA non-coding upstream 108831 17570951 ~ 17572613 (+)
G2302417 NA non-coding upstream 144330 17535644 ~ 17537114 (+)
G2302298 NA non-coding upstream 227418 17449663 ~ 17454026 (+)
G2302506 NA non-coding downstream 544 17682364 ~ 17683057 (+)
G2302520 NA non-coding downstream 14996 17696816 ~ 17699787 (+)
G2302521 NA non-coding downstream 18502 17700322 ~ 17700544 (+)
G2302526 NA non-coding downstream 20180 17702000 ~ 17702397 (+)
G2302470 NA non-coding downstream 35674 17717494 ~ 17719228 (+)
G2301841 NA other upstream 488327 17186565 ~ 17193117 (+)
LOC110488022 tfpi2 other upstream 847059 16827065 ~ 16834652 (+)
LOC110488019 LOC106570458 other upstream 892905 16785333 ~ 16788539 (+)
G2301522 LOC106570460 other upstream 1004773 16669607 ~ 16693934 (+)
LOC110488017 LOC106570464 other upstream 1041803 16603599 ~ 16639641 (+)
G2303854 hsf1b other downstream 1095525 18777345 ~ 18783027 (+)
LOC110488049 recql4 other downstream 1319522 18998633 ~ 19016439 (+)
dgat1a LOC106570407 other downstream 1672391 19354178 ~ 19379095 (+)
G2304678 NA other downstream 2146397 19828217 ~ 19829961 (+)
G2305956 NA other downstream 2871513 20553333 ~ 20553684 (+)

Expression


Co-expression Network