Gene
RNA
| Item | Value |
|---|---|
| gene id | G2302520 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 17696816 ~ 17699787 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| arrestin domain-containing protein 3-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2633956 | True | 371 | lncRNA | 0.46 | 2 | 17696816 | 17699787 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pex1 | pex1 | coding | upstream | 275304 | 17393354 ~ 17421512 (+) |
| LOC110488030 | LOC106588950 | coding | upstream | 308703 | 17380169 ~ 17388113 (+) |
| fam133b | fam133b | coding | upstream | 322479 | 17368768 ~ 17374337 (+) |
| LOC110488025 | cdk6 | coding | upstream | 336657 | 17294343 ~ 17364119 (+) |
| calcr | LOC106588943 | coding | upstream | 741246 | 16846734 ~ 16955570 (+) |
| clcc1 | LOC106570443 | coding | downstream | 4702 | 17704489 ~ 17713221 (+) |
| LOC110488036 | LOC106570445 | coding | downstream | 63219 | 17763006 ~ 17784596 (+) |
| LOC110488037 | LOC106570446 | coding | downstream | 87990 | 17787777 ~ 17812354 (+) |
| LOC110489398 | LOC106570447 | coding | downstream | 162642 | 17862429 ~ 18232900 (+) |
| ctnnal1 | LOC106588976 | coding | downstream | 624730 | 18324517 ~ 18449153 (+) |
| G2302506 | NA | non-coding | upstream | 13759 | 17682364 ~ 17683057 (+) |
| G2302505 | NA | non-coding | upstream | 14996 | 17681444 ~ 17681820 (+) |
| G2302462 | rp9 | non-coding | upstream | 25494 | 17670251 ~ 17671322 (+) |
| G2302430 | NA | non-coding | upstream | 120222 | 17576206 ~ 17576594 (+) |
| G2302427 | NA | non-coding | upstream | 124203 | 17570951 ~ 17572613 (+) |
| G2302521 | NA | non-coding | downstream | 535 | 17700322 ~ 17700544 (+) |
| G2302526 | NA | non-coding | downstream | 2213 | 17702000 ~ 17702397 (+) |
| G2302470 | NA | non-coding | downstream | 17707 | 17717494 ~ 17719228 (+) |
| G2302616 | NA | non-coding | downstream | 177170 | 17876957 ~ 17880270 (+) |
| G2302641 | NA | non-coding | downstream | 219947 | 17919734 ~ 17920809 (+) |
| G2301841 | NA | other | upstream | 503699 | 17186565 ~ 17193117 (+) |
| LOC110488022 | tfpi2 | other | upstream | 862431 | 16827065 ~ 16834652 (+) |
| LOC110488019 | LOC106570458 | other | upstream | 908277 | 16785333 ~ 16788539 (+) |
| G2301522 | LOC106570460 | other | upstream | 1020145 | 16669607 ~ 16693934 (+) |
| LOC110488017 | LOC106570464 | other | upstream | 1057175 | 16603599 ~ 16639641 (+) |
| G2303854 | hsf1b | other | downstream | 1077558 | 18777345 ~ 18783027 (+) |
| LOC110488049 | recql4 | other | downstream | 1301555 | 18998633 ~ 19016439 (+) |
| dgat1a | LOC106570407 | other | downstream | 1654424 | 19354178 ~ 19379095 (+) |
| G2304678 | NA | other | downstream | 2128430 | 19828217 ~ 19829961 (+) |
| G2305956 | NA | other | downstream | 2853546 | 20553333 ~ 20553684 (+) |
