G2302521


Basic Information

Item Value
gene id G2302521
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 17700322 ~ 17700544 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2633957
acacaagtatatatagATTATAAACAATGGagaatcgagctagggggtacaatatcacattacaattacataaggaccttaagggacatacatacactttcagttctaacagctttttttgttagtagagtatttaactgtcttaaaatacagttcaatttattGTAGGGTAAGAAAattagtttttttgtttgtaaatttacatttgtgtatatgaaatttg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2633957 True 223 lncRNA 0.28 1 17700322 17700544

Neighbor

gene id symbol gene type direction distance location
pex1 pex1 coding upstream 278810 17393354 ~ 17421512 (+)
LOC110488030 LOC106588950 coding upstream 312209 17380169 ~ 17388113 (+)
fam133b fam133b coding upstream 325985 17368768 ~ 17374337 (+)
LOC110488025 cdk6 coding upstream 340163 17294343 ~ 17364119 (+)
calcr LOC106588943 coding upstream 744752 16846734 ~ 16955570 (+)
clcc1 LOC106570443 coding downstream 3945 17704489 ~ 17713221 (+)
LOC110488036 LOC106570445 coding downstream 62462 17763006 ~ 17784596 (+)
LOC110488037 LOC106570446 coding downstream 87233 17787777 ~ 17812354 (+)
LOC110489398 LOC106570447 coding downstream 161885 17862429 ~ 18232900 (+)
ctnnal1 LOC106588976 coding downstream 623973 18324517 ~ 18449153 (+)
G2302520 NA non-coding upstream 535 17696816 ~ 17699787 (+)
G2302506 NA non-coding upstream 17265 17682364 ~ 17683057 (+)
G2302505 NA non-coding upstream 18502 17681444 ~ 17681820 (+)
G2302462 rp9 non-coding upstream 29000 17670251 ~ 17671322 (+)
G2302430 NA non-coding upstream 123728 17576206 ~ 17576594 (+)
G2302526 NA non-coding downstream 1456 17702000 ~ 17702397 (+)
G2302470 NA non-coding downstream 16950 17717494 ~ 17719228 (+)
G2302616 NA non-coding downstream 176413 17876957 ~ 17880270 (+)
G2302641 NA non-coding downstream 219190 17919734 ~ 17920809 (+)
G2302696 NA non-coding downstream 292542 17993086 ~ 17993557 (+)
G2301841 NA other upstream 507205 17186565 ~ 17193117 (+)
LOC110488022 tfpi2 other upstream 865937 16827065 ~ 16834652 (+)
LOC110488019 LOC106570458 other upstream 911783 16785333 ~ 16788539 (+)
G2301522 LOC106570460 other upstream 1023651 16669607 ~ 16693934 (+)
LOC110488017 LOC106570464 other upstream 1060681 16603599 ~ 16639641 (+)
G2303854 hsf1b other downstream 1076801 18777345 ~ 18783027 (+)
LOC110488049 recql4 other downstream 1300798 18998633 ~ 19016439 (+)
dgat1a LOC106570407 other downstream 1653667 19354178 ~ 19379095 (+)
G2304678 NA other downstream 2127673 19828217 ~ 19829961 (+)
G2305956 NA other downstream 2852789 20553333 ~ 20553684 (+)

Expression


Co-expression Network