Gene
RNA
| Item | Value |
|---|---|
| gene id | G2302769 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 18117820 ~ 18118048 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2634240 | True | 229 | lncRNA | 0.45 | 1 | 18117820 | 18118048 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110488037 | LOC106570446 | coding | upstream | 305466 | 17787777 ~ 17812354 (+) |
| LOC110488036 | LOC106570445 | coding | upstream | 333224 | 17763006 ~ 17784596 (+) |
| clcc1 | LOC106570443 | coding | upstream | 404599 | 17704489 ~ 17713221 (+) |
| pex1 | pex1 | coding | upstream | 696308 | 17393354 ~ 17421512 (+) |
| LOC110488030 | LOC106588950 | coding | upstream | 729707 | 17380169 ~ 17388113 (+) |
| ctnnal1 | LOC106588976 | coding | downstream | 206469 | 18324517 ~ 18449153 (+) |
| LOC110488042 | LOC106570416 | coding | downstream | 430905 | 18548953 ~ 18557288 (+) |
| LOC110488043 | LOC106588968 | coding | downstream | 489148 | 18607196 ~ 18669361 (+) |
| LOC100170213 | LOC100170213 | coding | downstream | 602944 | 18720992 ~ 18732451 (+) |
| si:ch211-80h18.1 | LOC100499602 | coding | downstream | 623649 | 18741697 ~ 18768506 (+) |
| G2302767 | NA | non-coding | upstream | 1944 | 18115567 ~ 18115876 (+) |
| G2302764 | NA | non-coding | upstream | 4763 | 18112845 ~ 18113057 (+) |
| G2302696 | NA | non-coding | upstream | 124263 | 17993086 ~ 17993557 (+) |
| G2302641 | NA | non-coding | upstream | 197011 | 17919734 ~ 17920809 (+) |
| G2302616 | NA | non-coding | upstream | 237550 | 17876957 ~ 17880270 (+) |
| G2302780 | NA | non-coding | downstream | 15036 | 18133084 ~ 18133321 (+) |
| G2302782 | NA | non-coding | downstream | 17219 | 18135267 ~ 18135489 (+) |
| G2302797 | NA | non-coding | downstream | 50223 | 18168271 ~ 18168505 (+) |
| G2302801 | NA | non-coding | downstream | 54221 | 18172269 ~ 18172546 (+) |
| G2302804 | NA | non-coding | downstream | 58264 | 18176312 ~ 18176582 (+) |
| G2301841 | NA | other | upstream | 924703 | 17186565 ~ 17193117 (+) |
| LOC110488022 | tfpi2 | other | upstream | 1283435 | 16827065 ~ 16834652 (+) |
| LOC110488019 | LOC106570458 | other | upstream | 1329281 | 16785333 ~ 16788539 (+) |
| G2301522 | LOC106570460 | other | upstream | 1441149 | 16669607 ~ 16693934 (+) |
| LOC110488017 | LOC106570464 | other | upstream | 1478179 | 16603599 ~ 16639641 (+) |
| G2303854 | hsf1b | other | downstream | 659297 | 18777345 ~ 18783027 (+) |
| LOC110488049 | recql4 | other | downstream | 883294 | 18998633 ~ 19016439 (+) |
| dgat1a | LOC106570407 | other | downstream | 1236163 | 19354178 ~ 19379095 (+) |
| G2304678 | NA | other | downstream | 1710169 | 19828217 ~ 19829961 (+) |
| G2305956 | NA | other | downstream | 2435285 | 20553333 ~ 20553684 (+) |
