G2302780


Basic Information

Item Value
gene id G2302780
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 18133084 ~ 18133321 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2634251
attaaactggccagtgattgggtctcaatgtaggcagcagcctgatggtcttgagatagatgctgtttttcagtctctcggtcccagctttgatgcacctgtgctgacctcgcattctggatggtagcggtgtgaagaggcagtggctcgggtggttattgtccttgatgatctttttggccttcctgtgacattgtatgctgtaggtgtcttggagggcaggtagtttgcccccagt

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2634251 True 238 lncRNA 0.51 1 18133084 18133321

Neighbor

gene id symbol gene type direction distance location
LOC110488037 LOC106570446 coding upstream 320730 17787777 ~ 17812354 (+)
LOC110488036 LOC106570445 coding upstream 348488 17763006 ~ 17784596 (+)
clcc1 LOC106570443 coding upstream 419863 17704489 ~ 17713221 (+)
pex1 pex1 coding upstream 711572 17393354 ~ 17421512 (+)
LOC110488030 LOC106588950 coding upstream 744971 17380169 ~ 17388113 (+)
ctnnal1 LOC106588976 coding downstream 191196 18324517 ~ 18449153 (+)
LOC110488042 LOC106570416 coding downstream 415632 18548953 ~ 18557288 (+)
LOC110488043 LOC106588968 coding downstream 473875 18607196 ~ 18669361 (+)
LOC100170213 LOC100170213 coding downstream 587671 18720992 ~ 18732451 (+)
si:ch211-80h18.1 LOC100499602 coding downstream 608376 18741697 ~ 18768506 (+)
G2302769 NA non-coding upstream 15036 18117820 ~ 18118048 (+)
G2302767 NA non-coding upstream 17208 18115567 ~ 18115876 (+)
G2302764 NA non-coding upstream 20027 18112845 ~ 18113057 (+)
G2302696 NA non-coding upstream 139527 17993086 ~ 17993557 (+)
G2302641 NA non-coding upstream 212275 17919734 ~ 17920809 (+)
G2302782 NA non-coding downstream 1946 18135267 ~ 18135489 (+)
G2302797 NA non-coding downstream 34950 18168271 ~ 18168505 (+)
G2302801 NA non-coding downstream 38948 18172269 ~ 18172546 (+)
G2302804 NA non-coding downstream 42991 18176312 ~ 18176582 (+)
G2302805 NA non-coding downstream 44369 18177690 ~ 18177971 (+)
G2301841 NA other upstream 939967 17186565 ~ 17193117 (+)
LOC110488022 tfpi2 other upstream 1298699 16827065 ~ 16834652 (+)
LOC110488019 LOC106570458 other upstream 1344545 16785333 ~ 16788539 (+)
G2301522 LOC106570460 other upstream 1456413 16669607 ~ 16693934 (+)
LOC110488017 LOC106570464 other upstream 1493443 16603599 ~ 16639641 (+)
G2303854 hsf1b other downstream 644024 18777345 ~ 18783027 (+)
LOC110488049 recql4 other downstream 868021 18998633 ~ 19016439 (+)
dgat1a LOC106570407 other downstream 1220890 19354178 ~ 19379095 (+)
G2304678 NA other downstream 1694896 19828217 ~ 19829961 (+)
G2305956 NA other downstream 2420012 20553333 ~ 20553684 (+)

Expression


Co-expression Network