G2302854


Basic Information

Item Value
gene id G2302854
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 18278172 ~ 18280543 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2634329
gttgacatgttgcagtagtagcagcagtagtagtcgtTGACTCGTTGcagtactagcagtagtagtagttgactAGTTGTAGTACTAGTTGTtgactagttgtagtagtagcagcagtagtagttgttgactagttgtagtagcggcagcagtagtagttgttgactagttgtagtagtagtagcagtagtagttgttgactagttgtagtagtagcagcagtagtagttgttgactagttgtagtagtagtagcagtagtagttgttgactagttgtagtagtagtagcagtagtagttgttgactagttgtagtagtagtagcagtagtagttgttgactagttgtagtagtagcagcagtagtagtagttgactagttgcagtagttggagcagtagtagtagttgacatgttgcagtagtagcagcagtagtagtcgtTGACTCGTTGcagtactagcagtagtagtagttgactAGTTGTAGTACTAGTTGTtgactagttgtagtagtagtagcagtagtagttgttgactagttgtagtagtagtagcagtagtagttgttgactagttgtagtagtagtagcagaagtagttgttgactagttgtagtagtagtagcagtagtagttgttgactagttgtagtagtagcagcagtagtagttgttgactagttgtagtagtagcagcagtagtagttgttgaCTAGttctagtagtagcagcagtagtagttgttgactagttgtagtagtagcagcagtagtagttgttgactagttgtagtagtagtagcagtagtagttgttgactagttgtagtagtagtagcagtagtagttgttgactagttgtagtagtagtagcagtagtagttgttgactagttgtagtagtagtagcagaagtagttgttgactagttgtagtagtagtagcagtagtagttgttgactagttgtagtagtagcagcagtagtagttgttgttgactagttgtagtagtagcagcagtagtagttgttgactagttgtagtagtagcagcagtagtagttgttgacatgtagtagtagcagcagtagtagttgacTAGTTGTAGTACTAGTTGTtgactagttgtagtagtagcagcagtagtagttgttgacatgtagtagtagcagtagtagtagttgactAGTTGTAGTACTAGTTGTtgactagttgtagtagtagcagcagtagtagttgttgactagttgtagtagtagcagcagtagtagttgttgactagttatagtagtagcagcagtagtagttgttgactagttgtagtagtagtagttgactagctgtagtagtagttgttgactagttgtagtagtagcagcagtagtagttgttgactagttgtagtagtagcagcagtagtagttgttgactagttgtagtagtagtagcagtagtagtagttgttgactagttgtagtagtagcagcagtagtagttgttgactagttgtagtagtagttgttgactagttgtagtagtagcagtagtagtagttgactagttgtagtagtagttgttgactagttgtagtagtagcagcagtagttgttgactagttgtagtagtagttgttgactagttgtagtagtagcagcagtagtagttgttgactagttgtagtagtagttgttgactagttgtagtagtagcagcagtagtagttgttgactagttgtagtagcggcagcagtagtagttgttgactagttgtagtagtagttgttgactagttgtagtagtagcagcagtagttgttgactagttgtagtagtagttgttgactagttgtagtagtagcagcagtagtagttgttgactagttgtagtagtagttgttgactagttgtagtagtagcagcagtagtagttgttgactagttgtagtagcggcagcagtagtagttgttgactagttgtagtagcggcagcagtagtagttgttgactagttgtagtagcggcagcagtagtagttgttgactagttgtagtagcggcagcagtagtagttgttgactagttgtagtagtagtagcagtagtagttgttgactagttgtagtagcggcagcagtagtagttgttgactagttgtagtagcggcagcagtagtagttgttgactagttgtagtagtagtagcagtagtagttgtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2634329 True 2206 lncRNA 0.40 3 18278172 18280543

Neighbor

gene id symbol gene type direction distance location
LOC110489398 LOC106570447 coding upstream 45272 17862429 ~ 18232900 (+)
LOC110488037 LOC106570446 coding upstream 465818 17787777 ~ 17812354 (+)
LOC110488036 LOC106570445 coding upstream 493576 17763006 ~ 17784596 (+)
clcc1 LOC106570443 coding upstream 564951 17704489 ~ 17713221 (+)
pex1 pex1 coding upstream 856660 17393354 ~ 17421512 (+)
ctnnal1 LOC106588976 coding downstream 43974 18324517 ~ 18449153 (+)
LOC110488042 LOC106570416 coding downstream 268410 18548953 ~ 18557288 (+)
LOC110488043 LOC106588968 coding downstream 326653 18607196 ~ 18669361 (+)
LOC100170213 LOC100170213 coding downstream 440449 18720992 ~ 18732451 (+)
si:ch211-80h18.1 LOC100499602 coding downstream 461154 18741697 ~ 18768506 (+)
G2302813 NA non-coding upstream 82241 18195721 ~ 18195931 (+)
G2302812 NA non-coding upstream 83557 18194407 ~ 18194615 (+)
G2302809 NA non-coding upstream 89628 18188337 ~ 18188544 (+)
G2302807 NA non-coding upstream 94182 18183776 ~ 18183990 (+)
G2302805 NA non-coding upstream 100201 18177690 ~ 18177971 (+)
G2302882 NA non-coding downstream 37262 18317805 ~ 18385920 (+)
G2302913 NA non-coding downstream 75306 18355849 ~ 18358238 (+)
G2302931 NA non-coding downstream 95629 18376172 ~ 18376665 (+)
G2302939 NA non-coding downstream 110706 18391249 ~ 18391470 (+)
G2302957 NA non-coding downstream 145662 18426205 ~ 18426445 (+)
G2301841 NA other upstream 1085055 17186565 ~ 17193117 (+)
LOC110488022 tfpi2 other upstream 1443787 16827065 ~ 16834652 (+)
LOC110488019 LOC106570458 other upstream 1489633 16785333 ~ 16788539 (+)
G2301522 LOC106570460 other upstream 1601501 16669607 ~ 16693934 (+)
LOC110488017 LOC106570464 other upstream 1638531 16603599 ~ 16639641 (+)
G2303854 hsf1b other downstream 496802 18777345 ~ 18783027 (+)
LOC110488049 recql4 other downstream 720799 18998633 ~ 19016439 (+)
dgat1a LOC106570407 other downstream 1073668 19354178 ~ 19379095 (+)
G2304678 NA other downstream 1547674 19828217 ~ 19829961 (+)
G2305956 NA other downstream 2272790 20553333 ~ 20553684 (+)

Expression


Co-expression Network